Protein–RNA interactions for Protein: P00395

MT-CO1, Cytochrome c oxidase subunit 1, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO1P00395 AC005695.3-201ENST00000614522 232 ntBASIC15.19■□□□□ 0.02
MT-CO1P00395 AP001002.3-201ENST00000623482 206 ntBASIC15.19■□□□□ 0.02
MT-CO1P00395 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC15.19■□□□□ 0.02
MT-CO1P00395 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
MT-CO1P00395 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC15.19■□□□□ 0.02
MT-CO1P00395 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
MT-CO1P00395 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC15.19■□□□□ 0.02
MT-CO1P00395 AC232323.1-201ENST00000540724 2099 ntBASIC15.19■□□□□ 0.02
MT-CO1P00395 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC15.19■□□□□ 0.02
MT-CO1P00395 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC15.19■□□□□ 0.02
MT-CO1P00395 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC15.19■□□□□ 0.02
MT-CO1P00395 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
MT-CO1P00395 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
MT-CO1P00395 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
MT-CO1P00395 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
MT-CO1P00395 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
MT-CO1P00395 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC15.19■□□□□ 0.02
MT-CO1P00395 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
MT-CO1P00395 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC15.19■□□□□ 0.02
MT-CO1P00395 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
MT-CO1P00395 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC15.19■□□□□ 0.02
MT-CO1P00395 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
MT-CO1P00395 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
MT-CO1P00395 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
MT-CO1P00395 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
MT-CO1P00395 USP35-204ENST00000530267 2419 ntTSL 2 BASIC15.18■□□□□ 0.02
MT-CO1P00395 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
MT-CO1P00395 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC15.18■□□□□ 0.02
MT-CO1P00395 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
MT-CO1P00395 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
MT-CO1P00395 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
MT-CO1P00395 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC15.18■□□□□ 0.02
MT-CO1P00395 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
MT-CO1P00395 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC15.18■□□□□ 0.02
MT-CO1P00395 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
MT-CO1P00395 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
MT-CO1P00395 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
MT-CO1P00395 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
MT-CO1P00395 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
MT-CO1P00395 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
MT-CO1P00395 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
MT-CO1P00395 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
MT-CO1P00395 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC15.18■□□□□ 0.02
MT-CO1P00395 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
MT-CO1P00395 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
MT-CO1P00395 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC15.18■□□□□ 0.02
MT-CO1P00395 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
MT-CO1P00395 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
MT-CO1P00395 AC104982.3-201ENST00000581995 514 ntBASIC15.18■□□□□ 0.02
MT-CO1P00395 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
MT-CO1P00395 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC15.18■□□□□ 0.02
MT-CO1P00395 AC244157.2-201ENST00000616239 1006 ntBASIC15.18■□□□□ 0.02
MT-CO1P00395 GPR182-203ENST00000622922 591 ntBASIC15.18■□□□□ 0.02
MT-CO1P00395 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC15.18■□□□□ 0.02
MT-CO1P00395 AC002472.3-201ENST00000640124 621 ntBASIC15.18■□□□□ 0.02
MT-CO1P00395 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
MT-CO1P00395 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
MT-CO1P00395 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC15.18■□□□□ 0.02
MT-CO1P00395 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
MT-CO1P00395 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
MT-CO1P00395 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC15.18■□□□□ 0.02
MT-CO1P00395 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
MT-CO1P00395 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
MT-CO1P00395 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
MT-CO1P00395 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
MT-CO1P00395 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
MT-CO1P00395 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
MT-CO1P00395 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
MT-CO1P00395 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
MT-CO1P00395 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC15.17■□□□□ 0.02
MT-CO1P00395 TK2-221ENST00000620035 5060 ntTSL 2 BASIC15.17■□□□□ 0.02
MT-CO1P00395 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC15.17■□□□□ 0.02
MT-CO1P00395 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC15.17■□□□□ 0.02
MT-CO1P00395 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
MT-CO1P00395 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
MT-CO1P00395 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
MT-CO1P00395 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
MT-CO1P00395 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
MT-CO1P00395 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
MT-CO1P00395 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
MT-CO1P00395 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
MT-CO1P00395 AC018529.2-202ENST00000611482 3087 ntBASIC15.17■□□□□ 0.02
MT-CO1P00395 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
MT-CO1P00395 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
MT-CO1P00395 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
MT-CO1P00395 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
MT-CO1P00395 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
MT-CO1P00395 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC15.17■□□□□ 0.02
MT-CO1P00395 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
MT-CO1P00395 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
MT-CO1P00395 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
MT-CO1P00395 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
MT-CO1P00395 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
MT-CO1P00395 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
MT-CO1P00395 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC15.17■□□□□ 0.02
MT-CO1P00395 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC15.17■□□□□ 0.02
MT-CO1P00395 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
MT-CO1P00395 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
MT-CO1P00395 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC15.17■□□□□ 0.02
MT-CO1P00395 AC079178.1-201ENST00000420915 656 ntBASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms