Protein–RNA interactions for Protein: O95602

POLR1A, DNA-directed RNA polymerase I subunit RPA1, humanhuman

Predicted RBP Predictions only

Length 1,720 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1AO95602 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC20.87■□□□□ 0.93
POLR1AO95602 CACNG7-202ENST00000391766 631 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
POLR1AO95602 ZNF576-205ENST00000529930 830 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
POLR1AO95602 OR5BD1P-201ENST00000532527 817 ntBASIC20.87■□□□□ 0.93
POLR1AO95602 AC008972.2-201ENST00000606587 494 ntBASIC20.87■□□□□ 0.93
POLR1AO95602 AC011462.4-201ENST00000616866 449 ntBASIC20.87■□□□□ 0.93
POLR1AO95602 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
POLR1AO95602 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
POLR1AO95602 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
POLR1AO95602 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.86■□□□□ 0.93
POLR1AO95602 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
POLR1AO95602 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
POLR1AO95602 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC20.86■□□□□ 0.93
POLR1AO95602 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
POLR1AO95602 AC106881.1-201ENST00000605849 3329 ntBASIC20.86■□□□□ 0.93
POLR1AO95602 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC20.86■□□□□ 0.93
POLR1AO95602 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
POLR1AO95602 COX8A-201ENST00000314133 507 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
POLR1AO95602 CTSL-202ENST00000342020 933 ntTSL 2 BASIC20.86■□□□□ 0.93
POLR1AO95602 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC20.86■□□□□ 0.93
POLR1AO95602 GULP1-204ENST00000409637 1242 ntTSL 2 BASIC20.86■□□□□ 0.93
POLR1AO95602 CSNK1G2P1-201ENST00000442675 955 ntBASIC20.86■□□□□ 0.93
POLR1AO95602 AL353150.1-201ENST00000456944 583 ntTSL 2 BASIC20.86■□□□□ 0.93
POLR1AO95602 KLF3-AS1-203ENST00000504219 627 ntTSL 3 BASIC20.86■□□□□ 0.93
POLR1AO95602 AC113391.2-201ENST00000512245 553 ntTSL 4 BASIC20.86■□□□□ 0.93
POLR1AO95602 TRPC7-AS1-201ENST00000514459 460 ntTSL 3 BASIC20.86■□□□□ 0.93
POLR1AO95602 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC20.86■□□□□ 0.93
POLR1AO95602 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
POLR1AO95602 AC020904.3-201ENST00000624199 442 ntBASIC20.86■□□□□ 0.93
POLR1AO95602 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
POLR1AO95602 KRT8P28-201ENST00000433288 1390 ntBASIC20.86■□□□□ 0.93
POLR1AO95602 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
POLR1AO95602 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
POLR1AO95602 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC20.86■□□□□ 0.93
POLR1AO95602 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC20.86■□□□□ 0.93
POLR1AO95602 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
POLR1AO95602 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
POLR1AO95602 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
POLR1AO95602 LAMP5-202ENST00000427562 1309 ntTSL 2 BASIC20.85■□□□□ 0.93
POLR1AO95602 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC20.85■□□□□ 0.93
POLR1AO95602 LTF-202ENST00000417439 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
POLR1AO95602 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
POLR1AO95602 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC20.85■□□□□ 0.93
POLR1AO95602 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
POLR1AO95602 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC20.85■□□□□ 0.93
POLR1AO95602 OTOS-201ENST00000319460 566 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
POLR1AO95602 JTB-202ENST00000356648 1040 ntTSL 2 BASIC20.85■□□□□ 0.93
POLR1AO95602 ZNRD1-203ENST00000376782 736 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
POLR1AO95602 SERBP1P2-201ENST00000436888 1164 ntBASIC20.85■□□□□ 0.93
POLR1AO95602 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC20.85■□□□□ 0.93
POLR1AO95602 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
POLR1AO95602 SCARNA12-201ENST00000459155 270 ntBASIC20.85■□□□□ 0.93
POLR1AO95602 LINC00173-201ENST00000470091 435 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
POLR1AO95602 LINC02171-201ENST00000508619 1033 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
POLR1AO95602 IGHV1-12-201ENST00000518307 205 ntBASIC20.85■□□□□ 0.93
POLR1AO95602 AC015712.5-201ENST00000558568 564 ntTSL 2 BASIC20.85■□□□□ 0.93
POLR1AO95602 AC013553.1-201ENST00000560906 267 ntBASIC20.85■□□□□ 0.93
POLR1AO95602 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC20.85■□□□□ 0.93
POLR1AO95602 APOC1-209ENST00000592885 562 ntTSL 3 BASIC20.85■□□□□ 0.93
POLR1AO95602 DUSP22-213ENST00000605035 1231 ntTSL 2 BASIC20.85■□□□□ 0.93
POLR1AO95602 CCDC113-206ENST00000616795 891 ntTSL 5 BASIC20.85■□□□□ 0.93
POLR1AO95602 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
POLR1AO95602 AC011270.2-201ENST00000624293 2550 ntBASIC20.85■□□□□ 0.93
POLR1AO95602 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
POLR1AO95602 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC20.85■□□□□ 0.93
POLR1AO95602 FES-203ENST00000394302 2133 ntTSL 5 BASIC20.85■□□□□ 0.93
POLR1AO95602 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
POLR1AO95602 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
POLR1AO95602 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC20.85■□□□□ 0.93
POLR1AO95602 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
POLR1AO95602 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
POLR1AO95602 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC20.85■□□□□ 0.93
POLR1AO95602 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC20.84■□□□□ 0.93
POLR1AO95602 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC20.84■□□□□ 0.93
POLR1AO95602 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC20.84■□□□□ 0.93
POLR1AO95602 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
POLR1AO95602 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC20.84■□□□□ 0.93
POLR1AO95602 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC20.84■□□□□ 0.93
POLR1AO95602 AF274858.1-201ENST00000406288 372 ntBASIC20.84■□□□□ 0.93
POLR1AO95602 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
POLR1AO95602 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC20.84■□□□□ 0.93
POLR1AO95602 ACTG1P19-201ENST00000418987 1116 ntBASIC20.84■□□□□ 0.93
POLR1AO95602 AC226150.1-201ENST00000544259 466 ntBASIC20.84■□□□□ 0.93
POLR1AO95602 AL162632.1-201ENST00000546784 548 ntTSL 4 BASIC20.84■□□□□ 0.93
POLR1AO95602 AC003686.1-201ENST00000550956 1034 ntBASIC20.84■□□□□ 0.93
POLR1AO95602 CYP4F36P-201ENST00000589193 186 ntBASIC20.84■□□□□ 0.93
POLR1AO95602 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC20.84■□□□□ 0.93
POLR1AO95602 AC010422.5-201ENST00000597961 585 ntAPPRIS P1 TSL 4 BASIC20.84■□□□□ 0.93
POLR1AO95602 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC20.84■□□□□ 0.93
POLR1AO95602 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
POLR1AO95602 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
POLR1AO95602 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC20.84■□□□□ 0.93
POLR1AO95602 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
POLR1AO95602 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
POLR1AO95602 BBS1-203ENST00000455748 1552 ntTSL 2 BASIC20.84■□□□□ 0.93
POLR1AO95602 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
POLR1AO95602 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC20.84■□□□□ 0.93
POLR1AO95602 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC20.84■□□□□ 0.93
POLR1AO95602 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
POLR1AO95602 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC20.84■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms