Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC12.46□□□□□ -0.41
ABCA1O95477 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC12.46□□□□□ -0.41
ABCA1O95477 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
ABCA1O95477 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
ABCA1O95477 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
ABCA1O95477 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
ABCA1O95477 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
ABCA1O95477 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC12.46□□□□□ -0.41
ABCA1O95477 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC12.46□□□□□ -0.41
ABCA1O95477 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC12.46□□□□□ -0.41
ABCA1O95477 GEMIN7-202ENST00000391951 716 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.42
ABCA1O95477 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC12.46□□□□□ -0.42
ABCA1O95477 AC243961.1-201ENST00000432559 384 ntTSL 5 BASIC12.46□□□□□ -0.42
ABCA1O95477 AC245056.1-201ENST00000437631 384 ntTSL 5 BASIC12.46□□□□□ -0.42
ABCA1O95477 OARD1-204ENST00000464633 717 ntTSL 2 BASIC12.46□□□□□ -0.42
ABCA1O95477 MESTP3-201ENST00000503460 968 ntBASIC12.46□□□□□ -0.42
ABCA1O95477 CFL1-206ENST00000527344 962 ntTSL 2 BASIC12.46□□□□□ -0.42
ABCA1O95477 AL160314.3-201ENST00000556041 767 ntBASIC12.46□□□□□ -0.42
ABCA1O95477 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC12.46□□□□□ -0.42
ABCA1O95477 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC12.46□□□□□ -0.42
ABCA1O95477 OR10B1P-201ENST00000601666 907 ntBASIC12.46□□□□□ -0.42
ABCA1O95477 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
ABCA1O95477 RN7SL736P-201ENST00000613111 269 ntBASIC12.46□□□□□ -0.42
ABCA1O95477 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC12.46□□□□□ -0.42
ABCA1O95477 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
ABCA1O95477 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
ABCA1O95477 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
ABCA1O95477 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
ABCA1O95477 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
ABCA1O95477 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
ABCA1O95477 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
ABCA1O95477 ILF3-AS1-201ENST00000591501 1983 ntBASIC12.46□□□□□ -0.42
ABCA1O95477 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
ABCA1O95477 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
ABCA1O95477 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
ABCA1O95477 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC12.46□□□□□ -0.42
ABCA1O95477 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
ABCA1O95477 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
ABCA1O95477 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
ABCA1O95477 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
ABCA1O95477 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC12.46□□□□□ -0.42
ABCA1O95477 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC12.46□□□□□ -0.42
ABCA1O95477 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
ABCA1O95477 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC12.46□□□□□ -0.42
ABCA1O95477 LTF-203ENST00000426532 2494 ntTSL 2 BASIC12.46□□□□□ -0.42
ABCA1O95477 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
ABCA1O95477 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
ABCA1O95477 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC12.45□□□□□ -0.42
ABCA1O95477 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC12.45□□□□□ -0.42
ABCA1O95477 AC084364.1-201ENST00000551967 1556 ntBASIC12.45□□□□□ -0.42
ABCA1O95477 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
ABCA1O95477 GAD1-201ENST00000344257 1029 ntTSL 5 BASIC12.45□□□□□ -0.42
ABCA1O95477 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC12.45□□□□□ -0.42
ABCA1O95477 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
ABCA1O95477 AC006335.1-201ENST00000445200 547 ntBASIC12.45□□□□□ -0.42
ABCA1O95477 LY6E-208ENST00000520531 490 ntTSL 2 BASIC12.45□□□□□ -0.42
ABCA1O95477 MIR4750-201ENST00000584564 56 ntBASIC12.45□□□□□ -0.42
ABCA1O95477 AC006453.1-201ENST00000636037 1257 ntBASIC12.45□□□□□ -0.42
ABCA1O95477 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
ABCA1O95477 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC12.45□□□□□ -0.42
ABCA1O95477 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC12.45□□□□□ -0.42
ABCA1O95477 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC12.45□□□□□ -0.42
ABCA1O95477 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC12.45□□□□□ -0.42
ABCA1O95477 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC12.45□□□□□ -0.42
ABCA1O95477 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
ABCA1O95477 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
ABCA1O95477 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
ABCA1O95477 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
ABCA1O95477 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
ABCA1O95477 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
ABCA1O95477 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC12.45□□□□□ -0.42
ABCA1O95477 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
ABCA1O95477 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
ABCA1O95477 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC12.45□□□□□ -0.42
ABCA1O95477 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
ABCA1O95477 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
ABCA1O95477 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
ABCA1O95477 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
ABCA1O95477 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
ABCA1O95477 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
ABCA1O95477 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC12.45□□□□□ -0.42
ABCA1O95477 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
ABCA1O95477 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC12.45□□□□□ -0.42
ABCA1O95477 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
ABCA1O95477 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
ABCA1O95477 NPPA-201ENST00000376476 728 ntTSL 3 BASIC12.45□□□□□ -0.42
ABCA1O95477 IGHV3-49-201ENST00000390625 439 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
ABCA1O95477 SMIM29-202ENST00000394990 792 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
ABCA1O95477 RPSAP31-201ENST00000416648 895 ntBASIC12.45□□□□□ -0.42
ABCA1O95477 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
ABCA1O95477 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC12.45□□□□□ -0.42
ABCA1O95477 FAM58BP-201ENST00000439056 645 ntBASIC12.45□□□□□ -0.42
ABCA1O95477 RBM4B-202ENST00000524637 867 ntTSL 5 BASIC12.45□□□□□ -0.42
ABCA1O95477 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC12.45□□□□□ -0.42
ABCA1O95477 AC009955.4-201ENST00000597192 544 ntBASIC12.45□□□□□ -0.42
ABCA1O95477 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC12.45□□□□□ -0.42
ABCA1O95477 C15orf39-202ENST00000394987 4430 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
ABCA1O95477 AR-208ENST00000612452 10676 ntTSL 5 BASIC12.45□□□□□ -0.42
ABCA1O95477 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
ABCA1O95477 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms