Protein–RNA interactions for Protein: O76039

CDKL5, Cyclin-dependent kinase-like 5, humanhuman

Predictions only

Length 1,030 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5O76039 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDKL5O76039 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC17.18■□□□□ 0.34
CDKL5O76039 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDKL5O76039 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC17.18■□□□□ 0.34
CDKL5O76039 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDKL5O76039 AC027601.5-201ENST00000624065 2482 ntBASIC17.18■□□□□ 0.34
CDKL5O76039 RN7SL832P-201ENST00000607781 1756 ntBASIC17.17■□□□□ 0.34
CDKL5O76039 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC17.17■□□□□ 0.34
CDKL5O76039 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC17.17■□□□□ 0.34
CDKL5O76039 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
CDKL5O76039 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDKL5O76039 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
CDKL5O76039 WARS-203ENST00000358655 2466 ntTSL 2 BASIC17.17■□□□□ 0.34
CDKL5O76039 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDKL5O76039 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
CDKL5O76039 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
CDKL5O76039 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
CDKL5O76039 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
CDKL5O76039 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC17.17■□□□□ 0.34
CDKL5O76039 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC17.17■□□□□ 0.34
CDKL5O76039 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC17.17■□□□□ 0.34
CDKL5O76039 RPL7P3-201ENST00000441388 714 ntBASIC17.17■□□□□ 0.34
CDKL5O76039 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC17.17■□□□□ 0.34
CDKL5O76039 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC17.17■□□□□ 0.34
CDKL5O76039 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
CDKL5O76039 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC17.17■□□□□ 0.34
CDKL5O76039 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC17.17■□□□□ 0.34
CDKL5O76039 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC17.17■□□□□ 0.34
CDKL5O76039 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDKL5O76039 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDKL5O76039 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC17.17■□□□□ 0.34
CDKL5O76039 UCKL1-AS1-201ENST00000623569 3602 ntBASIC17.17■□□□□ 0.34
CDKL5O76039 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
CDKL5O76039 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CDKL5O76039 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDKL5O76039 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDKL5O76039 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDKL5O76039 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDKL5O76039 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
CDKL5O76039 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CDKL5O76039 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
CDKL5O76039 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
CDKL5O76039 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDKL5O76039 GRK6P1-201ENST00000400595 1711 ntBASIC17.16■□□□□ 0.34
CDKL5O76039 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
CDKL5O76039 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC17.16■□□□□ 0.34
CDKL5O76039 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDKL5O76039 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDKL5O76039 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
CDKL5O76039 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CDKL5O76039 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDKL5O76039 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
CDKL5O76039 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDKL5O76039 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CDKL5O76039 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
CDKL5O76039 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDKL5O76039 MIR1202-201ENST00000408529 83 ntBASIC17.16■□□□□ 0.34
CDKL5O76039 USB1-202ENST00000423271 1217 ntTSL 2 BASIC17.16■□□□□ 0.34
CDKL5O76039 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC17.16■□□□□ 0.34
CDKL5O76039 AC234783.1-201ENST00000441761 496 ntBASIC17.16■□□□□ 0.34
CDKL5O76039 AL355994.2-201ENST00000447882 704 ntBASIC17.16■□□□□ 0.34
CDKL5O76039 AL035414.1-201ENST00000451327 857 ntBASIC17.16■□□□□ 0.34
CDKL5O76039 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CDKL5O76039 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
CDKL5O76039 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
CDKL5O76039 AC079316.1-201ENST00000548397 411 ntBASIC17.16■□□□□ 0.34
CDKL5O76039 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CDKL5O76039 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC17.16■□□□□ 0.34
CDKL5O76039 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC17.16■□□□□ 0.34
CDKL5O76039 MIR4683-201ENST00000579659 81 ntBASIC17.16■□□□□ 0.34
CDKL5O76039 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CDKL5O76039 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC17.16■□□□□ 0.34
CDKL5O76039 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDKL5O76039 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC17.16■□□□□ 0.34
CDKL5O76039 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC17.16■□□□□ 0.34
CDKL5O76039 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC17.16■□□□□ 0.34
CDKL5O76039 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDKL5O76039 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDKL5O76039 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDKL5O76039 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
CDKL5O76039 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CDKL5O76039 PDIA3P1-201ENST00000471856 1510 ntBASIC17.16■□□□□ 0.34
CDKL5O76039 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC17.16■□□□□ 0.34
CDKL5O76039 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
CDKL5O76039 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC17.16■□□□□ 0.34
CDKL5O76039 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDKL5O76039 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC17.15■□□□□ 0.34
CDKL5O76039 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDKL5O76039 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDKL5O76039 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDKL5O76039 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDKL5O76039 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDKL5O76039 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDKL5O76039 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC17.15■□□□□ 0.34
CDKL5O76039 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDKL5O76039 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDKL5O76039 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC17.15■□□□□ 0.34
CDKL5O76039 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDKL5O76039 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDKL5O76039 AC006504.5-208ENST00000588784 2401 ntBASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms