Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
SCN2BO60939 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SCN2BO60939 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SCN2BO60939 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
SCN2BO60939 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC14.03□□□□□ -0.16
SCN2BO60939 POM121L8P-201ENST00000417732 1281 ntBASIC14.03□□□□□ -0.16
SCN2BO60939 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SCN2BO60939 POM121L9P-203ENST00000441984 1285 ntBASIC14.03□□□□□ -0.16
SCN2BO60939 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SCN2BO60939 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SCN2BO60939 MESTP3-201ENST00000503460 968 ntBASIC14.03□□□□□ -0.16
SCN2BO60939 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC14.03□□□□□ -0.16
SCN2BO60939 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SCN2BO60939 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC14.03□□□□□ -0.16
SCN2BO60939 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC14.03□□□□□ -0.16
SCN2BO60939 WFDC1-204ENST00000613603 549 ntBASIC14.03□□□□□ -0.16
SCN2BO60939 AJ011932.1-201ENST00000621707 465 ntBASIC14.03□□□□□ -0.16
SCN2BO60939 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SCN2BO60939 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
SCN2BO60939 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
SCN2BO60939 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
SCN2BO60939 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
SCN2BO60939 KRT8P24-201ENST00000560290 1559 ntBASIC14.03□□□□□ -0.16
SCN2BO60939 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SCN2BO60939 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SCN2BO60939 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
SCN2BO60939 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC14.03□□□□□ -0.16
SCN2BO60939 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
SCN2BO60939 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SCN2BO60939 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SCN2BO60939 AC011498.7-201ENST00000624986 2027 ntBASIC14.03□□□□□ -0.16
SCN2BO60939 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
SCN2BO60939 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
SCN2BO60939 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
SCN2BO60939 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
SCN2BO60939 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC14.03□□□□□ -0.16
SCN2BO60939 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SCN2BO60939 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
SCN2BO60939 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
SCN2BO60939 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
SCN2BO60939 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SCN2BO60939 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
SCN2BO60939 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
SCN2BO60939 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
SCN2BO60939 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
SCN2BO60939 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC14.02□□□□□ -0.16
SCN2BO60939 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
SCN2BO60939 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SCN2BO60939 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC14.02□□□□□ -0.16
SCN2BO60939 AC015688.4-201ENST00000580780 1647 ntBASIC14.02□□□□□ -0.16
SCN2BO60939 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
SCN2BO60939 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SCN2BO60939 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.17
SCN2BO60939 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
SCN2BO60939 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SCN2BO60939 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
SCN2BO60939 CLUHP2-201ENST00000426660 1303 ntBASIC14.02□□□□□ -0.17
SCN2BO60939 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC14.02□□□□□ -0.17
SCN2BO60939 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC14.02□□□□□ -0.17
SCN2BO60939 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC14.02□□□□□ -0.17
SCN2BO60939 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
SCN2BO60939 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
SCN2BO60939 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC14.02□□□□□ -0.17
SCN2BO60939 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SCN2BO60939 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SCN2BO60939 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC14.02□□□□□ -0.17
SCN2BO60939 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
SCN2BO60939 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC14.02□□□□□ -0.17
SCN2BO60939 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.17
SCN2BO60939 TSPY16P-201ENST00000449843 468 ntBASIC14.02□□□□□ -0.17
SCN2BO60939 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
SCN2BO60939 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SCN2BO60939 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC14.02□□□□□ -0.17
SCN2BO60939 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC14.02□□□□□ -0.17
SCN2BO60939 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC14.02□□□□□ -0.17
SCN2BO60939 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
SCN2BO60939 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
SCN2BO60939 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SCN2BO60939 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SCN2BO60939 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SCN2BO60939 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SCN2BO60939 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC14.02□□□□□ -0.17
SCN2BO60939 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC14.02□□□□□ -0.17
SCN2BO60939 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.17
SCN2BO60939 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SCN2BO60939 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC14.02□□□□□ -0.17
SCN2BO60939 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.17
SCN2BO60939 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SCN2BO60939 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC14.02□□□□□ -0.17
SCN2BO60939 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SCN2BO60939 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SCN2BO60939 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SCN2BO60939 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SCN2BO60939 MSTO2P-201ENST00000314835 1709 ntBASIC14.01□□□□□ -0.17
SCN2BO60939 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC14.01□□□□□ -0.17
SCN2BO60939 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SCN2BO60939 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
SCN2BO60939 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC14.01□□□□□ -0.17
SCN2BO60939 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC14.01□□□□□ -0.17
SCN2BO60939 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 165.4 ms