Protein–RNA interactions for Protein: O15499

GSC2, Homeobox protein goosecoid-2, humanhuman

Predictions only

Length 205 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GSC2O15499 SPDYE9P-201ENST00000570642 692 ntBASIC14.24□□□□□ -0.13
GSC2O15499 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
GSC2O15499 SPDYE10P-202ENST00000612005 668 ntBASIC14.24□□□□□ -0.13
GSC2O15499 SPDYE8P-202ENST00000612377 668 ntBASIC14.24□□□□□ -0.13
GSC2O15499 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC14.24□□□□□ -0.13
GSC2O15499 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
GSC2O15499 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC14.24□□□□□ -0.13
GSC2O15499 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC14.24□□□□□ -0.13
GSC2O15499 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
GSC2O15499 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
GSC2O15499 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
GSC2O15499 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
GSC2O15499 F2-205ENST00000530231 1849 ntTSL 5 BASIC14.24□□□□□ -0.13
GSC2O15499 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC14.24□□□□□ -0.13
GSC2O15499 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC14.24□□□□□ -0.13
GSC2O15499 PIK3R6-204ENST00000619866 3041 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
GSC2O15499 KLHL13-209ENST00000545703 3322 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
GSC2O15499 KAZN-205ENST00000400798 3643 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
GSC2O15499 USH1G-202ENST00000614341 3558 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
GSC2O15499 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
GSC2O15499 SLC26A6-202ENST00000337000 2317 ntTSL 2 BASIC14.24□□□□□ -0.13
GSC2O15499 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
GSC2O15499 ITGB2-205ENST00000397850 3178 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
GSC2O15499 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
GSC2O15499 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
GSC2O15499 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC14.24□□□□□ -0.13
GSC2O15499 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
GSC2O15499 CHMP7-201ENST00000313219 3367 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
GSC2O15499 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
GSC2O15499 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC14.23□□□□□ -0.13
GSC2O15499 INSC-207ENST00000528567 2237 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
GSC2O15499 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC14.23□□□□□ -0.13
GSC2O15499 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC14.23□□□□□ -0.13
GSC2O15499 CTCFL-208ENST00000432255 2955 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
GSC2O15499 MAMDC4-202ENST00000445819 3895 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
GSC2O15499 TMEM41A-203ENST00000421852 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
GSC2O15499 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
GSC2O15499 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
GSC2O15499 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
GSC2O15499 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC14.23□□□□□ -0.13
GSC2O15499 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC14.23□□□□□ -0.13
GSC2O15499 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
GSC2O15499 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC14.23□□□□□ -0.13
GSC2O15499 LITAF-210ENST00000571976 548 ntTSL 2 BASIC14.23□□□□□ -0.13
GSC2O15499 LITAF-211ENST00000572255 516 ntTSL 4 BASIC14.23□□□□□ -0.13
GSC2O15499 LITAF-214ENST00000574703 486 ntTSL 2 BASIC14.23□□□□□ -0.13
GSC2O15499 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
GSC2O15499 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC14.23□□□□□ -0.13
GSC2O15499 AC025048.3-201ENST00000590609 569 ntBASIC14.23□□□□□ -0.13
GSC2O15499 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC14.23□□□□□ -0.13
GSC2O15499 AC026120.1-201ENST00000611536 926 ntBASIC14.23□□□□□ -0.13
GSC2O15499 AC005702.4-201ENST00000618393 416 ntBASIC14.23□□□□□ -0.13
GSC2O15499 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC14.23□□□□□ -0.13
GSC2O15499 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC14.23□□□□□ -0.13
GSC2O15499 TRIT1-202ENST00000372818 2034 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
GSC2O15499 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
GSC2O15499 PDHA1-212ENST00000540249 3277 ntTSL 2 BASIC14.23□□□□□ -0.13
GSC2O15499 RAB37-205ENST00000392614 2704 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
GSC2O15499 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC14.23□□□□□ -0.13
GSC2O15499 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
GSC2O15499 PLD1-201ENST00000331659 2906 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
GSC2O15499 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
GSC2O15499 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
GSC2O15499 EGFR-207ENST00000455089 3844 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
GSC2O15499 RAB37-204ENST00000392613 2617 ntAPPRIS ALT1 TSL 2 BASIC14.23□□□□□ -0.13
GSC2O15499 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
GSC2O15499 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
GSC2O15499 AL031595.1-201ENST00000623969 4709 ntBASIC14.23□□□□□ -0.13
GSC2O15499 DYNC1I1-202ENST00000359388 2843 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
GSC2O15499 CADM1-204ENST00000536727 3520 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
GSC2O15499 ZNF821-214ENST00000565601 1858 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
GSC2O15499 COX6B2-210ENST00000593184 2083 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
GSC2O15499 LRCH3-203ENST00000425562 2970 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
GSC2O15499 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC14.22□□□□□ -0.13
GSC2O15499 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
GSC2O15499 MLPH-201ENST00000264605 3823 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
GSC2O15499 KIZ-213ENST00000620891 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
GSC2O15499 SPTSSB-201ENST00000359175 3103 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
GSC2O15499 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
GSC2O15499 TUBB8P4-201ENST00000511806 1324 ntBASIC14.22□□□□□ -0.13
GSC2O15499 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC14.22□□□□□ -0.13
GSC2O15499 GPA33-201ENST00000367868 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
GSC2O15499 MEX3B-202ENST00000558133 4333 ntBASIC14.22□□□□□ -0.13
GSC2O15499 MARK2P9-201ENST00000430958 1727 ntBASIC14.22□□□□□ -0.13
GSC2O15499 DYNC1I2-203ENST00000409197 2572 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
GSC2O15499 DYNC1I2-206ENST00000409773 2583 ntTSL 2 BASIC14.22□□□□□ -0.13
GSC2O15499 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
GSC2O15499 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC14.22□□□□□ -0.13
GSC2O15499 TPM4P1-201ENST00000436100 807 ntBASIC14.22□□□□□ -0.13
GSC2O15499 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC14.22□□□□□ -0.13
GSC2O15499 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
GSC2O15499 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC14.22□□□□□ -0.13
GSC2O15499 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC14.22□□□□□ -0.13
GSC2O15499 KRT126P-201ENST00000549467 1181 ntBASIC14.22□□□□□ -0.13
GSC2O15499 AC000095.1-201ENST00000603208 874 ntBASIC14.22□□□□□ -0.13
GSC2O15499 LINC01115-203ENST00000606068 577 ntBASIC14.22□□□□□ -0.13
GSC2O15499 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
GSC2O15499 RN7SL828P-201ENST00000607615 303 ntBASIC14.22□□□□□ -0.13
GSC2O15499 AC091812.2-201ENST00000619081 385 ntBASIC14.22□□□□□ -0.13
GSC2O15499 MIR6069-201ENST00000620069 79 ntBASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms