Protein–RNA interactions for Protein: A8K7I4

CLCA1, Calcium-activated chloride channel regulator 1, humanhuman

Predictions only

Length 914 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCA1A8K7I4 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
CLCA1A8K7I4 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
CLCA1A8K7I4 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CLCA1A8K7I4 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CLCA1A8K7I4 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CLCA1A8K7I4 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
CLCA1A8K7I4 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC13.9□□□□□ -0.18
CLCA1A8K7I4 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
CLCA1A8K7I4 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CLCA1A8K7I4 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC13.9□□□□□ -0.18
CLCA1A8K7I4 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CLCA1A8K7I4 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC13.9□□□□□ -0.18
CLCA1A8K7I4 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CLCA1A8K7I4 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CLCA1A8K7I4 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CLCA1A8K7I4 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
CLCA1A8K7I4 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
CLCA1A8K7I4 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
CLCA1A8K7I4 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC13.9□□□□□ -0.19
CLCA1A8K7I4 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
CLCA1A8K7I4 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CLCA1A8K7I4 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CLCA1A8K7I4 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC13.89□□□□□ -0.19
CLCA1A8K7I4 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
CLCA1A8K7I4 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CLCA1A8K7I4 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
CLCA1A8K7I4 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
CLCA1A8K7I4 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CLCA1A8K7I4 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CLCA1A8K7I4 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CLCA1A8K7I4 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CLCA1A8K7I4 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CLCA1A8K7I4 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC13.89□□□□□ -0.19
CLCA1A8K7I4 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
CLCA1A8K7I4 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CLCA1A8K7I4 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CLCA1A8K7I4 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC13.89□□□□□ -0.19
CLCA1A8K7I4 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC13.89□□□□□ -0.19
CLCA1A8K7I4 HIST1H2BPS3-201ENST00000419683 341 ntBASIC13.89□□□□□ -0.19
CLCA1A8K7I4 RPL28-204ENST00000431533 590 ntTSL 2 BASIC13.89□□□□□ -0.19
CLCA1A8K7I4 USP32P1-208ENST00000506594 1164 ntBASIC13.89□□□□□ -0.19
CLCA1A8K7I4 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC13.89□□□□□ -0.19
CLCA1A8K7I4 PTP4A1P2-201ENST00000546033 454 ntBASIC13.89□□□□□ -0.19
CLCA1A8K7I4 RPL28-206ENST00000558752 671 ntTSL 3 BASIC13.89□□□□□ -0.19
CLCA1A8K7I4 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC13.89□□□□□ -0.19
CLCA1A8K7I4 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC13.89□□□□□ -0.19
CLCA1A8K7I4 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC13.89□□□□□ -0.19
CLCA1A8K7I4 BTNL10-201ENST00000595971 695 ntBASIC13.89□□□□□ -0.19
CLCA1A8K7I4 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC13.89□□□□□ -0.19
CLCA1A8K7I4 AC233724.13-201ENST00000598383 410 ntBASIC13.89□□□□□ -0.19
CLCA1A8K7I4 AC093813.1-201ENST00000605066 256 ntBASIC13.89□□□□□ -0.19
CLCA1A8K7I4 AL512343.1-201ENST00000605837 169 ntBASIC13.89□□□□□ -0.19
CLCA1A8K7I4 METTL26-214ENST00000614890 801 ntTSL 3 BASIC13.89□□□□□ -0.19
CLCA1A8K7I4 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC13.89□□□□□ -0.19
CLCA1A8K7I4 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CLCA1A8K7I4 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC13.89□□□□□ -0.19
CLCA1A8K7I4 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CLCA1A8K7I4 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CLCA1A8K7I4 DKFZP434A062-201ENST00000573103 5021 ntBASIC13.89□□□□□ -0.19
CLCA1A8K7I4 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC13.89□□□□□ -0.19
CLCA1A8K7I4 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CLCA1A8K7I4 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CLCA1A8K7I4 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CLCA1A8K7I4 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CLCA1A8K7I4 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC13.89□□□□□ -0.19
CLCA1A8K7I4 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CLCA1A8K7I4 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
CLCA1A8K7I4 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CLCA1A8K7I4 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CLCA1A8K7I4 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CLCA1A8K7I4 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC13.89□□□□□ -0.19
CLCA1A8K7I4 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CLCA1A8K7I4 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CLCA1A8K7I4 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CLCA1A8K7I4 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CLCA1A8K7I4 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC13.88□□□□□ -0.19
CLCA1A8K7I4 TCAF1P1-201ENST00000414990 2232 ntBASIC13.88□□□□□ -0.19
CLCA1A8K7I4 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
CLCA1A8K7I4 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CLCA1A8K7I4 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CLCA1A8K7I4 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC13.88□□□□□ -0.19
CLCA1A8K7I4 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CLCA1A8K7I4 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CLCA1A8K7I4 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CLCA1A8K7I4 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC13.88□□□□□ -0.19
CLCA1A8K7I4 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
CLCA1A8K7I4 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CLCA1A8K7I4 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
CLCA1A8K7I4 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CLCA1A8K7I4 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CLCA1A8K7I4 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC13.88□□□□□ -0.19
CLCA1A8K7I4 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CLCA1A8K7I4 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CLCA1A8K7I4 AC018665.1-201ENST00000622927 1362 ntBASIC13.88□□□□□ -0.19
CLCA1A8K7I4 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC13.88□□□□□ -0.19
CLCA1A8K7I4 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CLCA1A8K7I4 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CLCA1A8K7I4 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CLCA1A8K7I4 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
CLCA1A8K7I4 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms