Protein–RNA interactions for Protein: A6NKT7

RGPD3, RanBP2-like and GRIP domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3A6NKT7 AC079250.1-201ENST00000456046 531 ntBASIC17.9■□□□□ 0.46
RGPD3A6NKT7 FAM86JP-202ENST00000484500 988 ntBASIC17.9■□□□□ 0.46
RGPD3A6NKT7 AC233724.9-201ENST00000511694 407 ntBASIC17.9■□□□□ 0.46
RGPD3A6NKT7 SPRY4-AS1-206ENST00000515288 539 ntTSL 2 BASIC17.9■□□□□ 0.46
RGPD3A6NKT7 CD44-224ENST00000526669 870 ntTSL 5 BASIC17.9■□□□□ 0.46
RGPD3A6NKT7 IDH3A-213ENST00000559205 566 ntTSL 4 BASIC17.9■□□□□ 0.46
RGPD3A6NKT7 AC137936.2-202ENST00000638124 1146 ntTSL 5 BASIC17.9■□□□□ 0.46
RGPD3A6NKT7 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC17.9■□□□□ 0.46
RGPD3A6NKT7 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RGPD3A6NKT7 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RGPD3A6NKT7 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
RGPD3A6NKT7 AC020658.6-201ENST00000623564 1870 ntBASIC17.9■□□□□ 0.46
RGPD3A6NKT7 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
RGPD3A6NKT7 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC17.9■□□□□ 0.46
RGPD3A6NKT7 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
RGPD3A6NKT7 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC17.89■□□□□ 0.46
RGPD3A6NKT7 CCL17-201ENST00000219244 615 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RGPD3A6NKT7 POP5-201ENST00000341039 913 ntTSL 2 BASIC17.89■□□□□ 0.45
RGPD3A6NKT7 AC093495.1-201ENST00000420253 1067 ntTSL 4 BASIC17.89■□□□□ 0.45
RGPD3A6NKT7 AL355500.1-201ENST00000439421 297 ntTSL 3 BASIC17.89■□□□□ 0.45
RGPD3A6NKT7 CDK7-211ENST00000514676 1164 ntTSL 5 BASIC17.89■□□□□ 0.45
RGPD3A6NKT7 TBX5-AS1-202ENST00000531024 766 ntTSL 3 BASIC17.89■□□□□ 0.45
RGPD3A6NKT7 BLOC1S1-203ENST00000548925 571 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RGPD3A6NKT7 HNRNPC-221ENST00000555883 1182 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RGPD3A6NKT7 SCAMP5-216ENST00000568081 710 ntTSL 2 BASIC17.89■□□□□ 0.45
RGPD3A6NKT7 LIMD2-210ENST00000582055 509 ntTSL 2 BASIC17.89■□□□□ 0.45
RGPD3A6NKT7 ZNF235-203ENST00000589248 532 ntTSL 3 BASIC17.89■□□□□ 0.45
RGPD3A6NKT7 CYP1B1-AS1-204ENST00000589303 579 ntTSL 5 BASIC17.89■□□□□ 0.45
RGPD3A6NKT7 SRD5A3-AS1-203ENST00000591915 709 ntTSL 5 BASIC17.89■□□□□ 0.45
RGPD3A6NKT7 IRF3-213ENST00000596765 710 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RGPD3A6NKT7 MMP19-202ENST00000409200 1431 ntTSL 2 BASIC17.89■□□□□ 0.45
RGPD3A6NKT7 MPZL3-204ENST00000527472 1381 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RGPD3A6NKT7 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC17.89■□□□□ 0.45
RGPD3A6NKT7 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RGPD3A6NKT7 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC17.89■□□□□ 0.45
RGPD3A6NKT7 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC17.89■□□□□ 0.45
RGPD3A6NKT7 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
RGPD3A6NKT7 WAC-202ENST00000347934 2839 ntTSL 5 BASIC17.89■□□□□ 0.45
RGPD3A6NKT7 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
RGPD3A6NKT7 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RGPD3A6NKT7 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RGPD3A6NKT7 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RGPD3A6NKT7 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC17.89■□□□□ 0.45
RGPD3A6NKT7 AL139384.1-201ENST00000612143 3047 ntBASIC17.89■□□□□ 0.45
RGPD3A6NKT7 RNF181-201ENST00000306368 569 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
RGPD3A6NKT7 OR6S1-201ENST00000320704 996 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
RGPD3A6NKT7 NR2C2AP-201ENST00000331552 1293 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RGPD3A6NKT7 MAL-204ENST00000354078 831 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RGPD3A6NKT7 KRTAP1-5-201ENST00000361883 1177 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
RGPD3A6NKT7 PCLAF-202ENST00000380258 911 ntTSL 2 BASIC17.89■□□□□ 0.45
RGPD3A6NKT7 AC103592.1-201ENST00000394513 664 ntBASIC17.89■□□□□ 0.45
RGPD3A6NKT7 WDR54-202ENST00000409791 854 ntTSL 3 BASIC17.89■□□□□ 0.45
RGPD3A6NKT7 NR2C2AP-202ENST00000420605 859 ntTSL 2 BASIC17.89■□□□□ 0.45
RGPD3A6NKT7 LINC01824-201ENST00000436082 528 ntTSL 4 BASIC17.89■□□□□ 0.45
RGPD3A6NKT7 RNF181-203ENST00000441634 844 ntAPPRIS ALT1 TSL 2 BASIC17.89■□□□□ 0.45
RGPD3A6NKT7 SMAD1-AS1-201ENST00000513542 481 ntTSL 2 BASIC17.89■□□□□ 0.45
RGPD3A6NKT7 AC026470.4-201ENST00000565812 308 ntTSL 3 BASIC17.89■□□□□ 0.45
RGPD3A6NKT7 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC17.89■□□□□ 0.45
RGPD3A6NKT7 MIR5091-201ENST00000578707 93 ntBASIC17.89■□□□□ 0.45
RGPD3A6NKT7 RN7SL478P-201ENST00000584358 298 ntBASIC17.89■□□□□ 0.45
RGPD3A6NKT7 LINC02081-201ENST00000586185 877 ntTSL 3 BASIC17.89■□□□□ 0.45
RGPD3A6NKT7 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RGPD3A6NKT7 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
RGPD3A6NKT7 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RGPD3A6NKT7 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC17.88■□□□□ 0.45
RGPD3A6NKT7 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RGPD3A6NKT7 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
RGPD3A6NKT7 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RGPD3A6NKT7 AL121753.2-201ENST00000624581 1461 ntBASIC17.88■□□□□ 0.45
RGPD3A6NKT7 AC015909.5-201ENST00000624336 2266 ntBASIC17.88■□□□□ 0.45
RGPD3A6NKT7 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC17.88■□□□□ 0.45
RGPD3A6NKT7 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RGPD3A6NKT7 SESN3-201ENST00000278499 1710 ntTSL 2 BASIC17.88■□□□□ 0.45
RGPD3A6NKT7 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RGPD3A6NKT7 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RGPD3A6NKT7 LYRM1-202ENST00000396052 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RGPD3A6NKT7 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RGPD3A6NKT7 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RGPD3A6NKT7 SLC37A3-201ENST00000326232 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RGPD3A6NKT7 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC17.88■□□□□ 0.45
RGPD3A6NKT7 RBP4-203ENST00000371469 814 ntTSL 5 BASIC17.88■□□□□ 0.45
RGPD3A6NKT7 AL021391.1-201ENST00000454439 545 ntTSL 4 BASIC17.88■□□□□ 0.45
RGPD3A6NKT7 IQSEC2-205ENST00000498281 673 ntTSL 3 BASIC17.88■□□□□ 0.45
RGPD3A6NKT7 ZNF816-208ENST00000535506 529 ntTSL 4 BASIC17.88■□□□□ 0.45
RGPD3A6NKT7 GOLT1B-206ENST00000542038 933 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RGPD3A6NKT7 AC140912.1-202ENST00000561802 194 ntTSL 3 BASIC17.88■□□□□ 0.45
RGPD3A6NKT7 AC007223.1-201ENST00000564076 572 ntTSL 3 BASIC17.88■□□□□ 0.45
RGPD3A6NKT7 AL031710.1-201ENST00000570022 468 ntTSL 2 BASIC17.88■□□□□ 0.45
RGPD3A6NKT7 AL499606.1-201ENST00000627866 413 ntTSL 3 BASIC17.88■□□□□ 0.45
RGPD3A6NKT7 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
RGPD3A6NKT7 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
RGPD3A6NKT7 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RGPD3A6NKT7 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC17.88■□□□□ 0.45
RGPD3A6NKT7 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
RGPD3A6NKT7 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC17.88■□□□□ 0.45
RGPD3A6NKT7 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RGPD3A6NKT7 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RGPD3A6NKT7 OSCP1-201ENST00000235532 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RGPD3A6NKT7 OSCP1-203ENST00000356637 1463 ntTSL 5 BASIC17.88■□□□□ 0.45
RGPD3A6NKT7 FAM189A2-202ENST00000303068 2051 ntTSL 2 BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms