Protein–RNA interactions for Protein: A4D1U4

LCHN, Protein LCHN, humanhuman

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCHNA4D1U4 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
LCHNA4D1U4 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LCHNA4D1U4 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
LCHNA4D1U4 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LCHNA4D1U4 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LCHNA4D1U4 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
LCHNA4D1U4 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC15.67■□□□□ 0.1
LCHNA4D1U4 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
LCHNA4D1U4 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC15.67■□□□□ 0.1
LCHNA4D1U4 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
LCHNA4D1U4 BID-213ENST00000615414 2236 ntTSL 5 BASIC15.67■□□□□ 0.1
LCHNA4D1U4 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
LCHNA4D1U4 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LCHNA4D1U4 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
LCHNA4D1U4 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LCHNA4D1U4 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LCHNA4D1U4 CRYBB3-201ENST00000215855 867 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LCHNA4D1U4 NHP2-202ENST00000314397 599 ntTSL 2 BASIC15.67■□□□□ 0.1
LCHNA4D1U4 LY86-202ENST00000379953 1197 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
LCHNA4D1U4 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
LCHNA4D1U4 LIF-202ENST00000403987 592 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
LCHNA4D1U4 IFI35-203ENST00000415816 1241 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
LCHNA4D1U4 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC15.67■□□□□ 0.1
LCHNA4D1U4 DPY19L2P5-201ENST00000456300 331 ntBASIC15.67■□□□□ 0.1
LCHNA4D1U4 RN7SL530P-201ENST00000485097 298 ntBASIC15.67■□□□□ 0.1
LCHNA4D1U4 AC105390.1-201ENST00000511330 560 ntTSL 4 BASIC15.67■□□□□ 0.1
LCHNA4D1U4 AC091564.6-201ENST00000526633 487 ntTSL 3 BASIC15.67■□□□□ 0.1
LCHNA4D1U4 AC003982.2-201ENST00000536933 365 ntTSL 3 BASIC15.67■□□□□ 0.1
LCHNA4D1U4 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC15.67■□□□□ 0.1
LCHNA4D1U4 KRT16P3-202ENST00000580113 1012 ntTSL 3 BASIC15.67■□□□□ 0.1
LCHNA4D1U4 KRT16P1-203ENST00000581027 1012 ntTSL 5 BASIC15.67■□□□□ 0.1
LCHNA4D1U4 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
LCHNA4D1U4 AC073592.2-201ENST00000623062 780 ntBASIC15.67■□□□□ 0.1
LCHNA4D1U4 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC15.67■□□□□ 0.1
LCHNA4D1U4 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LCHNA4D1U4 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LCHNA4D1U4 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC15.67■□□□□ 0.1
LCHNA4D1U4 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LCHNA4D1U4 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
LCHNA4D1U4 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LCHNA4D1U4 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC15.67■□□□□ 0.1
LCHNA4D1U4 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LCHNA4D1U4 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC15.67■□□□□ 0.1
LCHNA4D1U4 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
LCHNA4D1U4 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
LCHNA4D1U4 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LCHNA4D1U4 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC15.67■□□□□ 0.1
LCHNA4D1U4 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC15.67■□□□□ 0.1
LCHNA4D1U4 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LCHNA4D1U4 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC15.67■□□□□ 0.1
LCHNA4D1U4 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC15.66■□□□□ 0.1
LCHNA4D1U4 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
LCHNA4D1U4 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LCHNA4D1U4 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
LCHNA4D1U4 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LCHNA4D1U4 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LCHNA4D1U4 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC15.66■□□□□ 0.1
LCHNA4D1U4 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC15.66■□□□□ 0.1
LCHNA4D1U4 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
LCHNA4D1U4 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LCHNA4D1U4 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LCHNA4D1U4 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LCHNA4D1U4 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
LCHNA4D1U4 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC15.66■□□□□ 0.1
LCHNA4D1U4 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
LCHNA4D1U4 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
LCHNA4D1U4 MYB-242ENST00000618728 3545 ntTSL 5 BASIC15.66■□□□□ 0.1
LCHNA4D1U4 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC15.66■□□□□ 0.1
LCHNA4D1U4 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LCHNA4D1U4 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LCHNA4D1U4 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
LCHNA4D1U4 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
LCHNA4D1U4 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
LCHNA4D1U4 CMTM5-202ENST00000342473 725 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LCHNA4D1U4 CMTM5-205ENST00000397227 818 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LCHNA4D1U4 GUSBP10-201ENST00000417412 665 ntBASIC15.66■□□□□ 0.1
LCHNA4D1U4 HCG27-204ENST00000424675 895 ntTSL 3 BASIC15.66■□□□□ 0.1
LCHNA4D1U4 PSMD4P1-201ENST00000433951 1109 ntBASIC15.66■□□□□ 0.1
LCHNA4D1U4 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC15.66■□□□□ 0.1
LCHNA4D1U4 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LCHNA4D1U4 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC15.66■□□□□ 0.1
LCHNA4D1U4 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LCHNA4D1U4 AREG-202ENST00000502307 956 ntTSL 5 BASIC15.66■□□□□ 0.1
LCHNA4D1U4 TMBIM4-208ENST00000542724 770 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LCHNA4D1U4 HIST2H2BF-204ENST00000545683 999 ntTSL 2 BASIC15.66■□□□□ 0.1
LCHNA4D1U4 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LCHNA4D1U4 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LCHNA4D1U4 CMTM5-208ENST00000555731 831 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LCHNA4D1U4 ATP2A1-AS1-201ENST00000561547 558 ntTSL 2 BASIC15.66■□□□□ 0.1
LCHNA4D1U4 HERC2P11-201ENST00000562845 725 ntBASIC15.66■□□□□ 0.1
LCHNA4D1U4 AL118516.1-201ENST00000564152 670 ntBASIC15.66■□□□□ 0.1
LCHNA4D1U4 AC100756.2-201ENST00000569537 736 ntBASIC15.66■□□□□ 0.1
LCHNA4D1U4 LINC02081-203ENST00000591384 867 ntTSL 3 BASIC15.66■□□□□ 0.1
LCHNA4D1U4 AP003392.6-201ENST00000607709 325 ntBASIC15.66■□□□□ 0.1
LCHNA4D1U4 AC114296.1-204ENST00000637197 1173 ntAPPRIS P5 TSL 5 BASIC15.66■□□□□ 0.1
LCHNA4D1U4 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LCHNA4D1U4 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
LCHNA4D1U4 STRN-202ENST00000379213 2254 ntTSL 5 BASIC15.66■□□□□ 0.1
LCHNA4D1U4 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LCHNA4D1U4 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms