Protein–RNA interactions for Protein: Q9Y620

RAD54B, DNA repair and recombination protein RAD54B, humanhuman

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD54BQ9Y620 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RAD54BQ9Y620 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
RAD54BQ9Y620 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RAD54BQ9Y620 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC15.35■□□□□ 0.05
RAD54BQ9Y620 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
RAD54BQ9Y620 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
RAD54BQ9Y620 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC15.35■□□□□ 0.05
RAD54BQ9Y620 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
RAD54BQ9Y620 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RAD54BQ9Y620 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC15.35■□□□□ 0.05
RAD54BQ9Y620 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC15.35■□□□□ 0.05
RAD54BQ9Y620 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RAD54BQ9Y620 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
RAD54BQ9Y620 AC005089.1-201ENST00000619486 2241 ntBASIC15.35■□□□□ 0.05
RAD54BQ9Y620 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RAD54BQ9Y620 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
RAD54BQ9Y620 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
RAD54BQ9Y620 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RAD54BQ9Y620 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
RAD54BQ9Y620 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
RAD54BQ9Y620 AC004945.1-201ENST00000416738 983 ntBASIC15.35■□□□□ 0.05
RAD54BQ9Y620 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC15.35■□□□□ 0.05
RAD54BQ9Y620 CALR4P-201ENST00000431943 946 ntBASIC15.35■□□□□ 0.05
RAD54BQ9Y620 PTPA-218ENST00000435132 618 ntTSL 2 BASIC15.35■□□□□ 0.05
RAD54BQ9Y620 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC15.35■□□□□ 0.05
RAD54BQ9Y620 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC15.35■□□□□ 0.05
RAD54BQ9Y620 AC004898.1-201ENST00000451057 766 ntBASIC15.35■□□□□ 0.05
RAD54BQ9Y620 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC15.35■□□□□ 0.05
RAD54BQ9Y620 FTLP10-202ENST00000505798 471 ntBASIC15.35■□□□□ 0.05
RAD54BQ9Y620 ALG3P1-201ENST00000508806 1114 ntBASIC15.35■□□□□ 0.05
RAD54BQ9Y620 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC15.35■□□□□ 0.05
RAD54BQ9Y620 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC15.35■□□□□ 0.05
RAD54BQ9Y620 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC15.35■□□□□ 0.05
RAD54BQ9Y620 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC15.35■□□□□ 0.05
RAD54BQ9Y620 AL451050.2-201ENST00000606967 682 ntBASIC15.35■□□□□ 0.05
RAD54BQ9Y620 AC138466.3-201ENST00000619983 221 ntBASIC15.35■□□□□ 0.05
RAD54BQ9Y620 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
RAD54BQ9Y620 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC15.35■□□□□ 0.05
RAD54BQ9Y620 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC15.35■□□□□ 0.05
RAD54BQ9Y620 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC15.35■□□□□ 0.05
RAD54BQ9Y620 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
RAD54BQ9Y620 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
RAD54BQ9Y620 CLUHP2-201ENST00000426660 1303 ntBASIC15.35■□□□□ 0.05
RAD54BQ9Y620 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC15.35■□□□□ 0.05
RAD54BQ9Y620 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC15.35■□□□□ 0.05
RAD54BQ9Y620 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
RAD54BQ9Y620 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RAD54BQ9Y620 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC15.35■□□□□ 0.05
RAD54BQ9Y620 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
RAD54BQ9Y620 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
RAD54BQ9Y620 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC15.35■□□□□ 0.05
RAD54BQ9Y620 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RAD54BQ9Y620 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
RAD54BQ9Y620 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RAD54BQ9Y620 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
RAD54BQ9Y620 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
RAD54BQ9Y620 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC15.35■□□□□ 0.05
RAD54BQ9Y620 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RAD54BQ9Y620 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
RAD54BQ9Y620 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
RAD54BQ9Y620 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC15.34■□□□□ 0.05
RAD54BQ9Y620 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RAD54BQ9Y620 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC15.34■□□□□ 0.05
RAD54BQ9Y620 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RAD54BQ9Y620 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RAD54BQ9Y620 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC15.34■□□□□ 0.05
RAD54BQ9Y620 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RAD54BQ9Y620 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RAD54BQ9Y620 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
RAD54BQ9Y620 RN7SKP230-201ENST00000365642 335 ntBASIC15.34■□□□□ 0.05
RAD54BQ9Y620 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
RAD54BQ9Y620 AC079178.1-201ENST00000420915 656 ntBASIC15.34■□□□□ 0.05
RAD54BQ9Y620 HNRNPA1P63-201ENST00000427917 963 ntBASIC15.34■□□□□ 0.05
RAD54BQ9Y620 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC15.34■□□□□ 0.05
RAD54BQ9Y620 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC15.34■□□□□ 0.05
RAD54BQ9Y620 AKR7A2P1-201ENST00000460134 915 ntBASIC15.34■□□□□ 0.05
RAD54BQ9Y620 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RAD54BQ9Y620 HIST2H2BC-201ENST00000498492 580 ntBASIC15.34■□□□□ 0.05
RAD54BQ9Y620 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC15.34■□□□□ 0.05
RAD54BQ9Y620 GCOM2-201ENST00000509133 1104 ntBASIC15.34■□□□□ 0.05
RAD54BQ9Y620 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC15.34■□□□□ 0.05
RAD54BQ9Y620 NEU3-202ENST00000526068 431 ntTSL 2 BASIC15.34■□□□□ 0.05
RAD54BQ9Y620 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC15.34■□□□□ 0.05
RAD54BQ9Y620 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC15.34■□□□□ 0.05
RAD54BQ9Y620 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC15.34■□□□□ 0.05
RAD54BQ9Y620 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC15.34■□□□□ 0.05
RAD54BQ9Y620 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC15.34■□□□□ 0.05
RAD54BQ9Y620 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC15.34■□□□□ 0.05
RAD54BQ9Y620 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC15.34■□□□□ 0.05
RAD54BQ9Y620 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC15.34■□□□□ 0.05
RAD54BQ9Y620 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
RAD54BQ9Y620 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC15.34■□□□□ 0.05
RAD54BQ9Y620 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
RAD54BQ9Y620 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC15.34■□□□□ 0.05
RAD54BQ9Y620 MRPL37P1-201ENST00000592451 1337 ntBASIC15.34■□□□□ 0.05
RAD54BQ9Y620 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
RAD54BQ9Y620 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC15.34■□□□□ 0.05
RAD54BQ9Y620 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
RAD54BQ9Y620 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RAD54BQ9Y620 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC15.34■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 60.4 ms