Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NPIPA1Q9UND3 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
NPIPA1Q9UND3 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NPIPA1Q9UND3 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC13.7□□□□□ -0.22
NPIPA1Q9UND3 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
NPIPA1Q9UND3 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
NPIPA1Q9UND3 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
NPIPA1Q9UND3 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC13.7□□□□□ -0.22
NPIPA1Q9UND3 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NPIPA1Q9UND3 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
NPIPA1Q9UND3 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC13.7□□□□□ -0.22
NPIPA1Q9UND3 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
NPIPA1Q9UND3 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
NPIPA1Q9UND3 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NPIPA1Q9UND3 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
NPIPA1Q9UND3 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
NPIPA1Q9UND3 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
NPIPA1Q9UND3 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NPIPA1Q9UND3 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC13.69□□□□□ -0.22
NPIPA1Q9UND3 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NPIPA1Q9UND3 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
NPIPA1Q9UND3 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
NPIPA1Q9UND3 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
NPIPA1Q9UND3 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NPIPA1Q9UND3 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC13.69□□□□□ -0.22
NPIPA1Q9UND3 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC13.69□□□□□ -0.22
NPIPA1Q9UND3 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC13.69□□□□□ -0.22
NPIPA1Q9UND3 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
NPIPA1Q9UND3 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC13.69□□□□□ -0.22
NPIPA1Q9UND3 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NPIPA1Q9UND3 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC13.69□□□□□ -0.22
NPIPA1Q9UND3 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC13.69□□□□□ -0.22
NPIPA1Q9UND3 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC13.69□□□□□ -0.22
NPIPA1Q9UND3 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC13.69□□□□□ -0.22
NPIPA1Q9UND3 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC13.69□□□□□ -0.22
NPIPA1Q9UND3 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC13.69□□□□□ -0.22
NPIPA1Q9UND3 AC091804.1-201ENST00000486888 567 ntBASIC13.69□□□□□ -0.22
NPIPA1Q9UND3 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
NPIPA1Q9UND3 NKG7-204ENST00000595217 816 ntTSL 2 BASIC13.69□□□□□ -0.22
NPIPA1Q9UND3 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC13.69□□□□□ -0.22
NPIPA1Q9UND3 AC073413.1-201ENST00000603927 732 ntBASIC13.69□□□□□ -0.22
NPIPA1Q9UND3 AL451050.2-201ENST00000606967 682 ntBASIC13.69□□□□□ -0.22
NPIPA1Q9UND3 AC007663.3-201ENST00000609632 465 ntBASIC13.69□□□□□ -0.22
NPIPA1Q9UND3 DIO1-215ENST00000610607 796 ntTSL 5 BASIC13.69□□□□□ -0.22
NPIPA1Q9UND3 ZACNP1-201ENST00000612259 710 ntBASIC13.69□□□□□ -0.22
NPIPA1Q9UND3 PPA1-206ENST00000625364 644 ntTSL 5 BASIC13.69□□□□□ -0.22
NPIPA1Q9UND3 AL603764.1-201ENST00000636452 321 ntBASIC13.69□□□□□ -0.22
NPIPA1Q9UND3 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
NPIPA1Q9UND3 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NPIPA1Q9UND3 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NPIPA1Q9UND3 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
NPIPA1Q9UND3 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NPIPA1Q9UND3 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
NPIPA1Q9UND3 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
NPIPA1Q9UND3 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
NPIPA1Q9UND3 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NPIPA1Q9UND3 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC13.69□□□□□ -0.22
NPIPA1Q9UND3 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC13.69□□□□□ -0.22
NPIPA1Q9UND3 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NPIPA1Q9UND3 AC018735.1-201ENST00000437208 1502 ntBASIC13.69□□□□□ -0.22
NPIPA1Q9UND3 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC13.69□□□□□ -0.22
NPIPA1Q9UND3 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
NPIPA1Q9UND3 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC13.69□□□□□ -0.22
NPIPA1Q9UND3 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NPIPA1Q9UND3 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
NPIPA1Q9UND3 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
NPIPA1Q9UND3 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
NPIPA1Q9UND3 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC13.69□□□□□ -0.22
NPIPA1Q9UND3 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
NPIPA1Q9UND3 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC13.68□□□□□ -0.22
NPIPA1Q9UND3 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NPIPA1Q9UND3 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NPIPA1Q9UND3 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
NPIPA1Q9UND3 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC13.68□□□□□ -0.22
NPIPA1Q9UND3 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NPIPA1Q9UND3 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
NPIPA1Q9UND3 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NPIPA1Q9UND3 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NPIPA1Q9UND3 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NPIPA1Q9UND3 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC13.68□□□□□ -0.22
NPIPA1Q9UND3 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NPIPA1Q9UND3 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NPIPA1Q9UND3 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NPIPA1Q9UND3 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
NPIPA1Q9UND3 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC13.68□□□□□ -0.22
NPIPA1Q9UND3 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
NPIPA1Q9UND3 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NPIPA1Q9UND3 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC13.68□□□□□ -0.22
NPIPA1Q9UND3 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
NPIPA1Q9UND3 PES1-204ENST00000402284 2144 ntTSL 5 BASIC13.68□□□□□ -0.22
NPIPA1Q9UND3 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
NPIPA1Q9UND3 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC13.68□□□□□ -0.22
NPIPA1Q9UND3 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NPIPA1Q9UND3 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC13.68□□□□□ -0.22
NPIPA1Q9UND3 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NPIPA1Q9UND3 AC005077.2-201ENST00000449786 690 ntBASIC13.68□□□□□ -0.22
NPIPA1Q9UND3 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC13.68□□□□□ -0.22
NPIPA1Q9UND3 AC126915.1-201ENST00000522847 1038 ntBASIC13.68□□□□□ -0.22
NPIPA1Q9UND3 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC13.68□□□□□ -0.22
NPIPA1Q9UND3 AL021578.1-201ENST00000613646 709 ntBASIC13.68□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms