Protein–RNA interactions for Protein: Q9UBP0

SPAST, Spastin, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPASTQ9UBP0 AC012508.2-201ENST00000567613 1472 ntBASIC14.78□□□□□ -0.04
SPASTQ9UBP0 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC14.78□□□□□ -0.04
SPASTQ9UBP0 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC14.78□□□□□ -0.04
SPASTQ9UBP0 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SPASTQ9UBP0 FKBP4P6-201ENST00000457486 1332 ntBASIC14.78□□□□□ -0.04
SPASTQ9UBP0 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC14.78□□□□□ -0.04
SPASTQ9UBP0 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC14.78□□□□□ -0.04
SPASTQ9UBP0 SLC25A24P2-201ENST00000415059 510 ntBASIC14.78□□□□□ -0.04
SPASTQ9UBP0 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
SPASTQ9UBP0 FNTAP2-201ENST00000430308 634 ntBASIC14.78□□□□□ -0.04
SPASTQ9UBP0 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC14.78□□□□□ -0.04
SPASTQ9UBP0 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC14.78□□□□□ -0.04
SPASTQ9UBP0 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC14.78□□□□□ -0.04
SPASTQ9UBP0 CHMP1AP1-201ENST00000445563 662 ntBASIC14.78□□□□□ -0.04
SPASTQ9UBP0 HIST2H2BB-201ENST00000449108 381 ntBASIC14.78□□□□□ -0.04
SPASTQ9UBP0 AC026434.2-201ENST00000506094 1078 ntBASIC14.78□□□□□ -0.04
SPASTQ9UBP0 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC14.78□□□□□ -0.04
SPASTQ9UBP0 AP003171.2-201ENST00000528208 925 ntBASIC14.78□□□□□ -0.04
SPASTQ9UBP0 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC14.78□□□□□ -0.04
SPASTQ9UBP0 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC14.78□□□□□ -0.04
SPASTQ9UBP0 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC14.78□□□□□ -0.04
SPASTQ9UBP0 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC14.78□□□□□ -0.04
SPASTQ9UBP0 AP001002.3-201ENST00000623482 206 ntBASIC14.78□□□□□ -0.04
SPASTQ9UBP0 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC14.78□□□□□ -0.04
SPASTQ9UBP0 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SPASTQ9UBP0 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
SPASTQ9UBP0 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SPASTQ9UBP0 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC14.78□□□□□ -0.04
SPASTQ9UBP0 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
SPASTQ9UBP0 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SPASTQ9UBP0 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC14.78□□□□□ -0.04
SPASTQ9UBP0 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC14.78□□□□□ -0.04
SPASTQ9UBP0 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SPASTQ9UBP0 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
SPASTQ9UBP0 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC14.78□□□□□ -0.04
SPASTQ9UBP0 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SPASTQ9UBP0 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC14.77□□□□□ -0.04
SPASTQ9UBP0 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
SPASTQ9UBP0 AC026748.1-201ENST00000624349 3251 ntBASIC14.77□□□□□ -0.04
SPASTQ9UBP0 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
SPASTQ9UBP0 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SPASTQ9UBP0 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
SPASTQ9UBP0 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
SPASTQ9UBP0 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
SPASTQ9UBP0 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC14.77□□□□□ -0.04
SPASTQ9UBP0 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
SPASTQ9UBP0 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SPASTQ9UBP0 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SPASTQ9UBP0 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
SPASTQ9UBP0 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
SPASTQ9UBP0 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SPASTQ9UBP0 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
SPASTQ9UBP0 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.05
SPASTQ9UBP0 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.05
SPASTQ9UBP0 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC14.77□□□□□ -0.05
SPASTQ9UBP0 BX284668.4-201ENST00000453917 508 ntBASIC14.77□□□□□ -0.05
SPASTQ9UBP0 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
SPASTQ9UBP0 AC004466.1-201ENST00000599515 1080 ntBASIC14.77□□□□□ -0.05
SPASTQ9UBP0 AC084346.2-201ENST00000607097 949 ntBASIC14.77□□□□□ -0.05
SPASTQ9UBP0 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
SPASTQ9UBP0 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
SPASTQ9UBP0 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
SPASTQ9UBP0 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
SPASTQ9UBP0 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
SPASTQ9UBP0 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SPASTQ9UBP0 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC14.77□□□□□ -0.05
SPASTQ9UBP0 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
SPASTQ9UBP0 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SPASTQ9UBP0 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SPASTQ9UBP0 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC14.77□□□□□ -0.05
SPASTQ9UBP0 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SPASTQ9UBP0 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
SPASTQ9UBP0 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC14.77□□□□□ -0.05
SPASTQ9UBP0 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SPASTQ9UBP0 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
SPASTQ9UBP0 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SPASTQ9UBP0 PES1-204ENST00000402284 2144 ntTSL 5 BASIC14.77□□□□□ -0.05
SPASTQ9UBP0 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SPASTQ9UBP0 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
SPASTQ9UBP0 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
SPASTQ9UBP0 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SPASTQ9UBP0 AC018735.1-201ENST00000437208 1502 ntBASIC14.76□□□□□ -0.05
SPASTQ9UBP0 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SPASTQ9UBP0 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
SPASTQ9UBP0 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC14.76□□□□□ -0.05
SPASTQ9UBP0 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
SPASTQ9UBP0 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SPASTQ9UBP0 AL157414.3-201ENST00000624276 1954 ntBASIC14.76□□□□□ -0.05
SPASTQ9UBP0 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC14.76□□□□□ -0.05
SPASTQ9UBP0 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SPASTQ9UBP0 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
SPASTQ9UBP0 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC14.76□□□□□ -0.05
SPASTQ9UBP0 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC14.76□□□□□ -0.05
SPASTQ9UBP0 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
SPASTQ9UBP0 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
SPASTQ9UBP0 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
SPASTQ9UBP0 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC14.76□□□□□ -0.05
SPASTQ9UBP0 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SPASTQ9UBP0 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
SPASTQ9UBP0 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms