Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HDAC6Q9UBN7 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HDAC6Q9UBN7 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
HDAC6Q9UBN7 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HDAC6Q9UBN7 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HDAC6Q9UBN7 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC16.72■□□□□ 0.27
HDAC6Q9UBN7 PES1-204ENST00000402284 2144 ntTSL 5 BASIC16.72■□□□□ 0.27
HDAC6Q9UBN7 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
HDAC6Q9UBN7 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC16.72■□□□□ 0.27
HDAC6Q9UBN7 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HDAC6Q9UBN7 INE2-201ENST00000630399 1874 ntBASIC16.72■□□□□ 0.27
HDAC6Q9UBN7 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
HDAC6Q9UBN7 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC16.72■□□□□ 0.27
HDAC6Q9UBN7 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
HDAC6Q9UBN7 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
HDAC6Q9UBN7 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
HDAC6Q9UBN7 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC16.72■□□□□ 0.27
HDAC6Q9UBN7 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HDAC6Q9UBN7 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HDAC6Q9UBN7 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC16.72■□□□□ 0.27
HDAC6Q9UBN7 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
HDAC6Q9UBN7 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC16.72■□□□□ 0.27
HDAC6Q9UBN7 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC16.72■□□□□ 0.27
HDAC6Q9UBN7 GHSR-202ENST00000427970 912 ntBASIC16.72■□□□□ 0.27
HDAC6Q9UBN7 RN7SL769P-201ENST00000469386 295 ntBASIC16.72■□□□□ 0.27
HDAC6Q9UBN7 IMP3P2-201ENST00000489760 475 ntBASIC16.72■□□□□ 0.27
HDAC6Q9UBN7 AC022217.1-201ENST00000521069 738 ntBASIC16.72■□□□□ 0.27
HDAC6Q9UBN7 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC16.72■□□□□ 0.27
HDAC6Q9UBN7 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
HDAC6Q9UBN7 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
HDAC6Q9UBN7 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HDAC6Q9UBN7 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
HDAC6Q9UBN7 RN7SL774P-201ENST00000577467 290 ntBASIC16.72■□□□□ 0.27
HDAC6Q9UBN7 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC16.72■□□□□ 0.27
HDAC6Q9UBN7 AL358472.3-201ENST00000608147 415 ntBASIC16.72■□□□□ 0.27
HDAC6Q9UBN7 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC16.72■□□□□ 0.27
HDAC6Q9UBN7 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC16.72■□□□□ 0.27
HDAC6Q9UBN7 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC16.72■□□□□ 0.27
HDAC6Q9UBN7 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC16.72■□□□□ 0.27
HDAC6Q9UBN7 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC16.72■□□□□ 0.27
HDAC6Q9UBN7 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC16.72■□□□□ 0.27
HDAC6Q9UBN7 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC16.72■□□□□ 0.27
HDAC6Q9UBN7 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
HDAC6Q9UBN7 AL137783.1-201ENST00000623494 1896 ntBASIC16.71■□□□□ 0.27
HDAC6Q9UBN7 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC16.71■□□□□ 0.27
HDAC6Q9UBN7 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
HDAC6Q9UBN7 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HDAC6Q9UBN7 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC16.71■□□□□ 0.27
HDAC6Q9UBN7 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC16.71■□□□□ 0.27
HDAC6Q9UBN7 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
HDAC6Q9UBN7 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HDAC6Q9UBN7 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
HDAC6Q9UBN7 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
HDAC6Q9UBN7 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC16.71■□□□□ 0.27
HDAC6Q9UBN7 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
HDAC6Q9UBN7 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
HDAC6Q9UBN7 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
HDAC6Q9UBN7 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
HDAC6Q9UBN7 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
HDAC6Q9UBN7 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC16.71■□□□□ 0.27
HDAC6Q9UBN7 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
HDAC6Q9UBN7 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
HDAC6Q9UBN7 RN7SKP175-201ENST00000408472 289 ntBASIC16.71■□□□□ 0.27
HDAC6Q9UBN7 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
HDAC6Q9UBN7 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC16.71■□□□□ 0.27
HDAC6Q9UBN7 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
HDAC6Q9UBN7 AC245884.6-201ENST00000515672 1067 ntBASIC16.71■□□□□ 0.27
HDAC6Q9UBN7 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC16.71■□□□□ 0.27
HDAC6Q9UBN7 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
HDAC6Q9UBN7 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC16.71■□□□□ 0.27
HDAC6Q9UBN7 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC16.71■□□□□ 0.27
HDAC6Q9UBN7 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC16.71■□□□□ 0.27
HDAC6Q9UBN7 EID1-202ENST00000560490 584 ntTSL 3 BASIC16.71■□□□□ 0.27
HDAC6Q9UBN7 COG4-212ENST00000564653 590 ntTSL 5 BASIC16.71■□□□□ 0.27
HDAC6Q9UBN7 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC16.71■□□□□ 0.27
HDAC6Q9UBN7 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC16.71■□□□□ 0.27
HDAC6Q9UBN7 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
HDAC6Q9UBN7 MIR4783-201ENST00000580343 82 ntBASIC16.71■□□□□ 0.27
HDAC6Q9UBN7 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
HDAC6Q9UBN7 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC16.71■□□□□ 0.27
HDAC6Q9UBN7 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC16.71■□□□□ 0.27
HDAC6Q9UBN7 BNIP3P13-201ENST00000599968 566 ntBASIC16.71■□□□□ 0.27
HDAC6Q9UBN7 AL645939.5-201ENST00000606834 243 ntBASIC16.71■□□□□ 0.27
HDAC6Q9UBN7 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC16.71■□□□□ 0.27
HDAC6Q9UBN7 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC16.71■□□□□ 0.27
HDAC6Q9UBN7 AC091812.3-201ENST00000621362 345 ntBASIC16.71■□□□□ 0.27
HDAC6Q9UBN7 CU633904.3-201ENST00000624042 1029 ntBASIC16.71■□□□□ 0.27
HDAC6Q9UBN7 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
HDAC6Q9UBN7 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HDAC6Q9UBN7 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HDAC6Q9UBN7 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
HDAC6Q9UBN7 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HDAC6Q9UBN7 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
HDAC6Q9UBN7 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
HDAC6Q9UBN7 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC16.71■□□□□ 0.27
HDAC6Q9UBN7 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
HDAC6Q9UBN7 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HDAC6Q9UBN7 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
HDAC6Q9UBN7 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
HDAC6Q9UBN7 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms