Protein–RNA interactions for Protein: Q9UBC3

DNMT3B, DNA (cytosine-5)-methyltransferase 3B, humanhuman

Known RBP Predictions only

Length 853 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3BQ9UBC3 AL136172.1-201ENST00000598590 1394 ntBASIC15.32■□□□□ 0.04
DNMT3BQ9UBC3 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
DNMT3BQ9UBC3 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
DNMT3BQ9UBC3 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
DNMT3BQ9UBC3 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
DNMT3BQ9UBC3 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
DNMT3BQ9UBC3 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC15.31■□□□□ 0.04
DNMT3BQ9UBC3 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
DNMT3BQ9UBC3 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
DNMT3BQ9UBC3 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
DNMT3BQ9UBC3 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
DNMT3BQ9UBC3 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
DNMT3BQ9UBC3 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
DNMT3BQ9UBC3 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
DNMT3BQ9UBC3 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
DNMT3BQ9UBC3 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
DNMT3BQ9UBC3 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
DNMT3BQ9UBC3 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
DNMT3BQ9UBC3 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC15.31■□□□□ 0.04
DNMT3BQ9UBC3 MECR-202ENST00000373791 2416 ntTSL 2 BASIC15.31■□□□□ 0.04
DNMT3BQ9UBC3 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC15.31■□□□□ 0.04
DNMT3BQ9UBC3 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
DNMT3BQ9UBC3 PSMG4-203ENST00000380306 726 ntTSL 3 BASIC15.31■□□□□ 0.04
DNMT3BQ9UBC3 AP000356.3-201ENST00000382243 753 ntBASIC15.31■□□□□ 0.04
DNMT3BQ9UBC3 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
DNMT3BQ9UBC3 DNAJB1P1-201ENST00000429417 1024 ntBASIC15.31■□□□□ 0.04
DNMT3BQ9UBC3 TSPY25P-201ENST00000429463 745 ntBASIC15.31■□□□□ 0.04
DNMT3BQ9UBC3 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
DNMT3BQ9UBC3 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
DNMT3BQ9UBC3 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC15.31■□□□□ 0.04
DNMT3BQ9UBC3 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC15.31■□□□□ 0.04
DNMT3BQ9UBC3 FOS-204ENST00000554617 796 ntTSL 2 BASIC15.31■□□□□ 0.04
DNMT3BQ9UBC3 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC15.31■□□□□ 0.04
DNMT3BQ9UBC3 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC15.31■□□□□ 0.04
DNMT3BQ9UBC3 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC15.31■□□□□ 0.04
DNMT3BQ9UBC3 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC15.31■□□□□ 0.04
DNMT3BQ9UBC3 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC15.31■□□□□ 0.04
DNMT3BQ9UBC3 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC15.31■□□□□ 0.04
DNMT3BQ9UBC3 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC15.31■□□□□ 0.04
DNMT3BQ9UBC3 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC15.31■□□□□ 0.04
DNMT3BQ9UBC3 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
DNMT3BQ9UBC3 CICP23-201ENST00000605013 2741 ntBASIC15.31■□□□□ 0.04
DNMT3BQ9UBC3 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
DNMT3BQ9UBC3 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
DNMT3BQ9UBC3 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
DNMT3BQ9UBC3 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
DNMT3BQ9UBC3 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC15.31■□□□□ 0.04
DNMT3BQ9UBC3 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC15.31■□□□□ 0.04
DNMT3BQ9UBC3 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
DNMT3BQ9UBC3 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
DNMT3BQ9UBC3 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC15.31■□□□□ 0.04
DNMT3BQ9UBC3 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC15.31■□□□□ 0.04
DNMT3BQ9UBC3 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
DNMT3BQ9UBC3 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC15.31■□□□□ 0.04
DNMT3BQ9UBC3 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
DNMT3BQ9UBC3 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
DNMT3BQ9UBC3 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC15.31■□□□□ 0.04
DNMT3BQ9UBC3 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
DNMT3BQ9UBC3 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
DNMT3BQ9UBC3 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
DNMT3BQ9UBC3 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
DNMT3BQ9UBC3 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
DNMT3BQ9UBC3 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
DNMT3BQ9UBC3 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
DNMT3BQ9UBC3 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
DNMT3BQ9UBC3 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
DNMT3BQ9UBC3 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
DNMT3BQ9UBC3 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
DNMT3BQ9UBC3 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
DNMT3BQ9UBC3 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
DNMT3BQ9UBC3 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
DNMT3BQ9UBC3 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
DNMT3BQ9UBC3 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
DNMT3BQ9UBC3 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
DNMT3BQ9UBC3 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
DNMT3BQ9UBC3 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
DNMT3BQ9UBC3 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
DNMT3BQ9UBC3 BANF1P3-201ENST00000412556 261 ntBASIC15.3■□□□□ 0.04
DNMT3BQ9UBC3 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC15.3■□□□□ 0.04
DNMT3BQ9UBC3 AL592076.1-201ENST00000424448 303 ntBASIC15.3■□□□□ 0.04
DNMT3BQ9UBC3 KRT8P28-201ENST00000433288 1390 ntBASIC15.3■□□□□ 0.04
DNMT3BQ9UBC3 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
DNMT3BQ9UBC3 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC15.3■□□□□ 0.04
DNMT3BQ9UBC3 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
DNMT3BQ9UBC3 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC15.3■□□□□ 0.04
DNMT3BQ9UBC3 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
DNMT3BQ9UBC3 CFL1-206ENST00000527344 962 ntTSL 2 BASIC15.3■□□□□ 0.04
DNMT3BQ9UBC3 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC15.3■□□□□ 0.04
DNMT3BQ9UBC3 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC15.3■□□□□ 0.04
DNMT3BQ9UBC3 TSPY26P-202ENST00000565928 3884 ntBASIC15.3■□□□□ 0.04
DNMT3BQ9UBC3 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC15.3■□□□□ 0.04
DNMT3BQ9UBC3 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC15.3■□□□□ 0.04
DNMT3BQ9UBC3 AC242376.2-201ENST00000619355 883 ntBASIC15.3■□□□□ 0.04
DNMT3BQ9UBC3 AL590440.2-201ENST00000641973 1595 ntBASIC15.3■□□□□ 0.04
DNMT3BQ9UBC3 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
DNMT3BQ9UBC3 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC15.3■□□□□ 0.04
DNMT3BQ9UBC3 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
DNMT3BQ9UBC3 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC15.3■□□□□ 0.04
DNMT3BQ9UBC3 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
DNMT3BQ9UBC3 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms