Protein–RNA interactions for Protein: Q9NWF4

SLC52A1, Solute carrier family 52, riboflavin transporter, member 1, humanhuman

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1Q9NWF4 THY1-209ENST00000580275 578 ntTSL 3 BASIC20.67■□□□□ 0.9
SLC52A1Q9NWF4 AP001269.2-201ENST00000590055 379 ntTSL 3 BASIC20.67■□□□□ 0.9
SLC52A1Q9NWF4 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC20.67■□□□□ 0.9
SLC52A1Q9NWF4 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SLC52A1Q9NWF4 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC20.67■□□□□ 0.9
SLC52A1Q9NWF4 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
SLC52A1Q9NWF4 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC20.67■□□□□ 0.9
SLC52A1Q9NWF4 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SLC52A1Q9NWF4 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SLC52A1Q9NWF4 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
SLC52A1Q9NWF4 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC20.66■□□□□ 0.9
SLC52A1Q9NWF4 AC138035.3-201ENST00000622706 2791 ntBASIC20.66■□□□□ 0.9
SLC52A1Q9NWF4 PGR-210ENST00000619228 3038 ntTSL 5 BASIC20.66■□□□□ 0.9
SLC52A1Q9NWF4 OR2K2-201ENST00000302681 1078 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
SLC52A1Q9NWF4 SURF4-203ENST00000371991 715 ntTSL 3 BASIC20.66■□□□□ 0.9
SLC52A1Q9NWF4 NME4-203ENST00000397722 1232 ntTSL 2 BASIC20.66■□□□□ 0.9
SLC52A1Q9NWF4 LRRC75A-AS1-213ENST00000484836 821 ntTSL 2 BASIC20.66■□□□□ 0.9
SLC52A1Q9NWF4 MUTYH-231ENST00000488731 740 ntTSL 5 BASIC20.66■□□□□ 0.9
SLC52A1Q9NWF4 RN7SL582P-201ENST00000491078 279 ntBASIC20.66■□□□□ 0.9
SLC52A1Q9NWF4 AC108474.1-201ENST00000507776 421 ntTSL 3 BASIC20.66■□□□□ 0.9
SLC52A1Q9NWF4 AC005740.1-201ENST00000515639 522 ntBASIC20.66■□□□□ 0.9
SLC52A1Q9NWF4 AC010186.1-201ENST00000546259 532 ntTSL 2 BASIC20.66■□□□□ 0.9
SLC52A1Q9NWF4 KLF17P1-201ENST00000547105 1126 ntBASIC20.66■□□□□ 0.9
SLC52A1Q9NWF4 DUXAP9-201ENST00000547220 665 ntTSL 3 BASIC20.66■□□□□ 0.9
SLC52A1Q9NWF4 TUBB3-208ENST00000555576 572 ntTSL 4 BASIC20.66■□□□□ 0.9
SLC52A1Q9NWF4 AC134312.2-201ENST00000563521 608 ntTSL 2 BASIC20.66■□□□□ 0.9
SLC52A1Q9NWF4 AP005264.5-201ENST00000590066 467 ntBASIC20.66■□□□□ 0.9
SLC52A1Q9NWF4 BLACE-202ENST00000616210 540 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
SLC52A1Q9NWF4 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SLC52A1Q9NWF4 CTSS-202ENST00000448301 1421 ntTSL 2 BASIC20.66■□□□□ 0.9
SLC52A1Q9NWF4 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SLC52A1Q9NWF4 CCT8L1P-201ENST00000465400 1674 ntBASIC20.66■□□□□ 0.9
SLC52A1Q9NWF4 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
SLC52A1Q9NWF4 AC019109.1-201ENST00000401725 1874 ntBASIC20.66■□□□□ 0.9
SLC52A1Q9NWF4 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SLC52A1Q9NWF4 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC20.66■□□□□ 0.9
SLC52A1Q9NWF4 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SLC52A1Q9NWF4 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SLC52A1Q9NWF4 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SLC52A1Q9NWF4 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC20.65■□□□□ 0.9
SLC52A1Q9NWF4 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC20.65■□□□□ 0.9
SLC52A1Q9NWF4 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
SLC52A1Q9NWF4 MSANTD2P1-201ENST00000445341 1368 ntBASIC20.65■□□□□ 0.9
SLC52A1Q9NWF4 APOA1-203ENST00000375320 940 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
SLC52A1Q9NWF4 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SLC52A1Q9NWF4 GRPEL2P1-201ENST00000453145 339 ntBASIC20.65■□□□□ 0.9
SLC52A1Q9NWF4 FOXN3-AS2-201ENST00000554071 1262 ntBASIC20.65■□□□□ 0.9
SLC52A1Q9NWF4 USB1-205ENST00000561743 1135 ntTSL 3 BASIC20.65■□□□□ 0.9
SLC52A1Q9NWF4 AC009041.1-201ENST00000565401 544 ntTSL 4 BASIC20.65■□□□□ 0.9
SLC52A1Q9NWF4 SHBG-210ENST00000572262 984 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SLC52A1Q9NWF4 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SLC52A1Q9NWF4 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
SLC52A1Q9NWF4 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SLC52A1Q9NWF4 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC20.65■□□□□ 0.9
SLC52A1Q9NWF4 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SLC52A1Q9NWF4 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
SLC52A1Q9NWF4 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC20.65■□□□□ 0.9
SLC52A1Q9NWF4 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SLC52A1Q9NWF4 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SLC52A1Q9NWF4 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SLC52A1Q9NWF4 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC20.65■□□□□ 0.9
SLC52A1Q9NWF4 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC20.64■□□□□ 0.9
SLC52A1Q9NWF4 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
SLC52A1Q9NWF4 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
SLC52A1Q9NWF4 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
SLC52A1Q9NWF4 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
SLC52A1Q9NWF4 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC20.64■□□□□ 0.89
SLC52A1Q9NWF4 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
SLC52A1Q9NWF4 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
SLC52A1Q9NWF4 ING4-207ENST00000446105 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SLC52A1Q9NWF4 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
SLC52A1Q9NWF4 TPRKB-203ENST00000409716 816 ntTSL 5 BASIC20.64■□□□□ 0.89
SLC52A1Q9NWF4 DDX39AP1-201ENST00000445147 1181 ntBASIC20.64■□□□□ 0.89
SLC52A1Q9NWF4 FAM86KP-201ENST00000509817 987 ntBASIC20.64■□□□□ 0.89
SLC52A1Q9NWF4 YPEL4-209ENST00000534711 889 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
SLC52A1Q9NWF4 AP005212.2-201ENST00000584979 510 ntBASIC20.64■□□□□ 0.89
SLC52A1Q9NWF4 AP005264.6-204ENST00000588436 719 ntBASIC20.64■□□□□ 0.89
SLC52A1Q9NWF4 CYP4F36P-201ENST00000589193 186 ntBASIC20.64■□□□□ 0.89
SLC52A1Q9NWF4 OCEL1-206ENST00000597836 1044 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
SLC52A1Q9NWF4 PEBP1P2-201ENST00000603980 558 ntBASIC20.64■□□□□ 0.89
SLC52A1Q9NWF4 AC006548.2-201ENST00000605217 529 ntBASIC20.64■□□□□ 0.89
SLC52A1Q9NWF4 AC010976.2-201ENST00000609697 852 ntBASIC20.64■□□□□ 0.89
SLC52A1Q9NWF4 AC091769.1-201ENST00000619576 568 ntBASIC20.64■□□□□ 0.89
SLC52A1Q9NWF4 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC20.64■□□□□ 0.89
SLC52A1Q9NWF4 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SLC52A1Q9NWF4 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
SLC52A1Q9NWF4 MX1-218ENST00000619682 1980 ntTSL 5 BASIC20.64■□□□□ 0.89
SLC52A1Q9NWF4 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
SLC52A1Q9NWF4 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SLC52A1Q9NWF4 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC20.64■□□□□ 0.89
SLC52A1Q9NWF4 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC20.64■□□□□ 0.89
SLC52A1Q9NWF4 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC20.64■□□□□ 0.89
SLC52A1Q9NWF4 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SLC52A1Q9NWF4 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
SLC52A1Q9NWF4 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC20.63■□□□□ 0.89
SLC52A1Q9NWF4 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC20.63■□□□□ 0.89
SLC52A1Q9NWF4 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SLC52A1Q9NWF4 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
SLC52A1Q9NWF4 PSMC4-202ENST00000455878 1333 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SLC52A1Q9NWF4 AC064801.2-201ENST00000625052 1303 ntBASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms