Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
AMBRA1Q9C0C7 AC020910.6-201ENST00000623084 1459 ntBASIC13.89□□□□□ -0.19
AMBRA1Q9C0C7 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
AMBRA1Q9C0C7 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
AMBRA1Q9C0C7 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
AMBRA1Q9C0C7 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
AMBRA1Q9C0C7 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
AMBRA1Q9C0C7 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
AMBRA1Q9C0C7 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC13.89□□□□□ -0.19
AMBRA1Q9C0C7 GOLGA6L11P-201ENST00000417252 1298 ntBASIC13.89□□□□□ -0.19
AMBRA1Q9C0C7 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC13.89□□□□□ -0.19
AMBRA1Q9C0C7 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
AMBRA1Q9C0C7 FAM86LP-201ENST00000478302 853 ntBASIC13.89□□□□□ -0.19
AMBRA1Q9C0C7 AC093004.1-201ENST00000508850 424 ntBASIC13.89□□□□□ -0.19
AMBRA1Q9C0C7 FTH1-202ENST00000526640 786 ntTSL 2 BASIC13.89□□□□□ -0.19
AMBRA1Q9C0C7 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC13.89□□□□□ -0.19
AMBRA1Q9C0C7 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC13.89□□□□□ -0.19
AMBRA1Q9C0C7 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
AMBRA1Q9C0C7 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
AMBRA1Q9C0C7 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
AMBRA1Q9C0C7 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
AMBRA1Q9C0C7 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC13.89□□□□□ -0.19
AMBRA1Q9C0C7 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
AMBRA1Q9C0C7 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC13.89□□□□□ -0.19
AMBRA1Q9C0C7 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC13.89□□□□□ -0.19
AMBRA1Q9C0C7 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC13.89□□□□□ -0.19
AMBRA1Q9C0C7 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC13.89□□□□□ -0.19
AMBRA1Q9C0C7 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
AMBRA1Q9C0C7 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
AMBRA1Q9C0C7 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
AMBRA1Q9C0C7 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC13.89□□□□□ -0.19
AMBRA1Q9C0C7 AC020658.7-201ENST00000624274 2442 ntBASIC13.89□□□□□ -0.19
AMBRA1Q9C0C7 AL591122.2-201ENST00000624125 1853 ntBASIC13.89□□□□□ -0.19
AMBRA1Q9C0C7 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
AMBRA1Q9C0C7 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
AMBRA1Q9C0C7 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
AMBRA1Q9C0C7 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
AMBRA1Q9C0C7 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
AMBRA1Q9C0C7 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
AMBRA1Q9C0C7 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
AMBRA1Q9C0C7 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
AMBRA1Q9C0C7 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
AMBRA1Q9C0C7 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
AMBRA1Q9C0C7 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
AMBRA1Q9C0C7 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
AMBRA1Q9C0C7 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
AMBRA1Q9C0C7 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
AMBRA1Q9C0C7 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC13.88□□□□□ -0.19
AMBRA1Q9C0C7 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
AMBRA1Q9C0C7 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC13.88□□□□□ -0.19
AMBRA1Q9C0C7 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC13.88□□□□□ -0.19
AMBRA1Q9C0C7 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
AMBRA1Q9C0C7 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
AMBRA1Q9C0C7 GRAP-202ENST00000395635 834 ntTSL 2 BASIC13.88□□□□□ -0.19
AMBRA1Q9C0C7 PIN1P1-201ENST00000412108 996 ntBASIC13.88□□□□□ -0.19
AMBRA1Q9C0C7 GSAP-205ENST00000430584 600 ntTSL 5 BASIC13.88□□□□□ -0.19
AMBRA1Q9C0C7 DFFBP1-201ENST00000433250 979 ntBASIC13.88□□□□□ -0.19
AMBRA1Q9C0C7 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC13.88□□□□□ -0.19
AMBRA1Q9C0C7 DOC2GP-202ENST00000514950 1163 ntBASIC13.88□□□□□ -0.19
AMBRA1Q9C0C7 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC13.88□□□□□ -0.19
AMBRA1Q9C0C7 CR383656.12-201ENST00000549567 513 ntBASIC13.88□□□□□ -0.19
AMBRA1Q9C0C7 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC13.88□□□□□ -0.19
AMBRA1Q9C0C7 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
AMBRA1Q9C0C7 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC13.88□□□□□ -0.19
AMBRA1Q9C0C7 AL049840.4-201ENST00000602422 811 ntBASIC13.88□□□□□ -0.19
AMBRA1Q9C0C7 AL662799.1-202ENST00000614205 422 ntBASIC13.88□□□□□ -0.19
AMBRA1Q9C0C7 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC13.88□□□□□ -0.19
AMBRA1Q9C0C7 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
AMBRA1Q9C0C7 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
AMBRA1Q9C0C7 AC019294.4-201ENST00000561777 2905 ntBASIC13.88□□□□□ -0.19
AMBRA1Q9C0C7 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
AMBRA1Q9C0C7 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
AMBRA1Q9C0C7 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
AMBRA1Q9C0C7 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
AMBRA1Q9C0C7 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
AMBRA1Q9C0C7 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
AMBRA1Q9C0C7 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
AMBRA1Q9C0C7 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
AMBRA1Q9C0C7 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
AMBRA1Q9C0C7 INVS-201ENST00000262456 2968 ntTSL 5 BASIC13.88□□□□□ -0.19
AMBRA1Q9C0C7 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
AMBRA1Q9C0C7 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
AMBRA1Q9C0C7 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
AMBRA1Q9C0C7 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
AMBRA1Q9C0C7 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
AMBRA1Q9C0C7 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
AMBRA1Q9C0C7 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
AMBRA1Q9C0C7 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
AMBRA1Q9C0C7 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
AMBRA1Q9C0C7 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
AMBRA1Q9C0C7 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
AMBRA1Q9C0C7 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC13.87□□□□□ -0.19
AMBRA1Q9C0C7 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC13.87□□□□□ -0.19
AMBRA1Q9C0C7 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
AMBRA1Q9C0C7 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
AMBRA1Q9C0C7 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
AMBRA1Q9C0C7 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC13.87□□□□□ -0.19
AMBRA1Q9C0C7 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
AMBRA1Q9C0C7 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
AMBRA1Q9C0C7 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms