Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 AC104784.1-201ENST00000473096 294 ntBASIC16.73■□□□□ 0.27
SYNGAP1Q96PV0 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SYNGAP1Q96PV0 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC16.73■□□□□ 0.27
SYNGAP1Q96PV0 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC16.73■□□□□ 0.27
SYNGAP1Q96PV0 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC16.73■□□□□ 0.27
SYNGAP1Q96PV0 COX6A1P2-201ENST00000620597 330 ntBASIC16.73■□□□□ 0.27
SYNGAP1Q96PV0 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SYNGAP1Q96PV0 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC16.73■□□□□ 0.27
SYNGAP1Q96PV0 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
SYNGAP1Q96PV0 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SYNGAP1Q96PV0 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
SYNGAP1Q96PV0 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SYNGAP1Q96PV0 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SYNGAP1Q96PV0 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SYNGAP1Q96PV0 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC16.73■□□□□ 0.27
SYNGAP1Q96PV0 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
SYNGAP1Q96PV0 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC16.73■□□□□ 0.27
SYNGAP1Q96PV0 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SYNGAP1Q96PV0 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC16.73■□□□□ 0.27
SYNGAP1Q96PV0 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SYNGAP1Q96PV0 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SYNGAP1Q96PV0 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
SYNGAP1Q96PV0 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
SYNGAP1Q96PV0 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
SYNGAP1Q96PV0 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
SYNGAP1Q96PV0 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SYNGAP1Q96PV0 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SYNGAP1Q96PV0 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC16.73■□□□□ 0.27
SYNGAP1Q96PV0 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
SYNGAP1Q96PV0 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SYNGAP1Q96PV0 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SYNGAP1Q96PV0 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC16.72■□□□□ 0.27
SYNGAP1Q96PV0 PON3-201ENST00000265627 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SYNGAP1Q96PV0 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SYNGAP1Q96PV0 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
SYNGAP1Q96PV0 AL096772.1-201ENST00000451135 781 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SYNGAP1Q96PV0 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC16.72■□□□□ 0.27
SYNGAP1Q96PV0 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC16.72■□□□□ 0.27
SYNGAP1Q96PV0 PFN2-206ENST00000461930 606 ntTSL 4 BASIC16.72■□□□□ 0.27
SYNGAP1Q96PV0 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC16.72■□□□□ 0.27
SYNGAP1Q96PV0 NEU3-205ENST00000531619 582 ntTSL 5 BASIC16.72■□□□□ 0.27
SYNGAP1Q96PV0 AP003419.4-201ENST00000616071 517 ntBASIC16.72■□□□□ 0.27
SYNGAP1Q96PV0 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC16.72■□□□□ 0.27
SYNGAP1Q96PV0 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
SYNGAP1Q96PV0 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
SYNGAP1Q96PV0 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
SYNGAP1Q96PV0 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SYNGAP1Q96PV0 ACE3P-201ENST00000423435 1973 ntBASIC16.72■□□□□ 0.27
SYNGAP1Q96PV0 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC16.72■□□□□ 0.27
SYNGAP1Q96PV0 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SYNGAP1Q96PV0 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
SYNGAP1Q96PV0 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC16.72■□□□□ 0.27
SYNGAP1Q96PV0 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC16.72■□□□□ 0.27
SYNGAP1Q96PV0 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SYNGAP1Q96PV0 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SYNGAP1Q96PV0 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
SYNGAP1Q96PV0 TCAF2P1-201ENST00000291129 2421 ntBASIC16.72■□□□□ 0.27
SYNGAP1Q96PV0 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
SYNGAP1Q96PV0 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SYNGAP1Q96PV0 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SYNGAP1Q96PV0 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SYNGAP1Q96PV0 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SYNGAP1Q96PV0 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SYNGAP1Q96PV0 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC16.72■□□□□ 0.27
SYNGAP1Q96PV0 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC16.72■□□□□ 0.27
SYNGAP1Q96PV0 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SYNGAP1Q96PV0 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
SYNGAP1Q96PV0 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
SYNGAP1Q96PV0 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC16.72■□□□□ 0.27
SYNGAP1Q96PV0 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SYNGAP1Q96PV0 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
SYNGAP1Q96PV0 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC16.72■□□□□ 0.27
SYNGAP1Q96PV0 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SYNGAP1Q96PV0 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SYNGAP1Q96PV0 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
SYNGAP1Q96PV0 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC16.72■□□□□ 0.27
SYNGAP1Q96PV0 ZEB1-AS1-208ENST00000607166 2503 ntBASIC16.71■□□□□ 0.27
SYNGAP1Q96PV0 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC16.71■□□□□ 0.27
SYNGAP1Q96PV0 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SYNGAP1Q96PV0 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SYNGAP1Q96PV0 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC16.71■□□□□ 0.27
SYNGAP1Q96PV0 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC16.71■□□□□ 0.27
SYNGAP1Q96PV0 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC16.71■□□□□ 0.27
SYNGAP1Q96PV0 RN7SL181P-201ENST00000462921 277 ntBASIC16.71■□□□□ 0.27
SYNGAP1Q96PV0 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC16.71■□□□□ 0.27
SYNGAP1Q96PV0 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC16.71■□□□□ 0.27
SYNGAP1Q96PV0 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC16.71■□□□□ 0.27
SYNGAP1Q96PV0 AC073573.1-201ENST00000550908 481 ntTSL 3 BASIC16.71■□□□□ 0.27
SYNGAP1Q96PV0 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SYNGAP1Q96PV0 AC133540.1-201ENST00000620845 1019 ntBASIC16.71■□□□□ 0.27
SYNGAP1Q96PV0 AC011491.1-203ENST00000637688 543 ntBASIC16.71■□□□□ 0.27
SYNGAP1Q96PV0 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC16.71■□□□□ 0.27
SYNGAP1Q96PV0 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC16.71■□□□□ 0.27
SYNGAP1Q96PV0 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC16.71■□□□□ 0.27
SYNGAP1Q96PV0 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SYNGAP1Q96PV0 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
SYNGAP1Q96PV0 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SYNGAP1Q96PV0 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC16.71■□□□□ 0.27
SYNGAP1Q96PV0 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SYNGAP1Q96PV0 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms