Protein–RNA interactions for Protein: Q96EP0

RNF31, E3 ubiquitin-protein ligase RNF31, humanhuman

Predictions only

Length 1,072 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF31Q96EP0 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
RNF31Q96EP0 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
RNF31Q96EP0 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC14.34□□□□□ -0.11
RNF31Q96EP0 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RNF31Q96EP0 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RNF31Q96EP0 DEF8-202ENST00000418391 852 ntTSL 2 BASIC14.34□□□□□ -0.11
RNF31Q96EP0 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC14.34□□□□□ -0.11
RNF31Q96EP0 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC14.34□□□□□ -0.11
RNF31Q96EP0 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC14.34□□□□□ -0.11
RNF31Q96EP0 RNMTL1P1-201ENST00000454103 560 ntBASIC14.34□□□□□ -0.11
RNF31Q96EP0 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC14.34□□□□□ -0.11
RNF31Q96EP0 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC14.34□□□□□ -0.11
RNF31Q96EP0 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC14.34□□□□□ -0.11
RNF31Q96EP0 RN7SL713P-201ENST00000582127 302 ntBASIC14.34□□□□□ -0.11
RNF31Q96EP0 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC14.34□□□□□ -0.11
RNF31Q96EP0 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC14.34□□□□□ -0.11
RNF31Q96EP0 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC14.34□□□□□ -0.11
RNF31Q96EP0 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC14.34□□□□□ -0.11
RNF31Q96EP0 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
RNF31Q96EP0 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RNF31Q96EP0 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RNF31Q96EP0 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC14.34□□□□□ -0.11
RNF31Q96EP0 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC14.34□□□□□ -0.11
RNF31Q96EP0 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
RNF31Q96EP0 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RNF31Q96EP0 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RNF31Q96EP0 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
RNF31Q96EP0 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RNF31Q96EP0 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RNF31Q96EP0 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
RNF31Q96EP0 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RNF31Q96EP0 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RNF31Q96EP0 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RNF31Q96EP0 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RNF31Q96EP0 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
RNF31Q96EP0 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
RNF31Q96EP0 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
RNF31Q96EP0 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
RNF31Q96EP0 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
RNF31Q96EP0 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.11
RNF31Q96EP0 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
RNF31Q96EP0 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.11
RNF31Q96EP0 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
RNF31Q96EP0 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
RNF31Q96EP0 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.11
RNF31Q96EP0 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RNF31Q96EP0 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
RNF31Q96EP0 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
RNF31Q96EP0 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RNF31Q96EP0 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RNF31Q96EP0 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RNF31Q96EP0 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RNF31Q96EP0 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC14.33□□□□□ -0.12
RNF31Q96EP0 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RNF31Q96EP0 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
RNF31Q96EP0 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RNF31Q96EP0 AC091046.1-201ENST00000331871 207 ntBASIC14.33□□□□□ -0.12
RNF31Q96EP0 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC14.33□□□□□ -0.12
RNF31Q96EP0 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC14.33□□□□□ -0.12
RNF31Q96EP0 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC14.33□□□□□ -0.12
RNF31Q96EP0 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RNF31Q96EP0 RGS5-214ENST00000429865 754 ntTSL 3 BASIC14.33□□□□□ -0.12
RNF31Q96EP0 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC14.33□□□□□ -0.12
RNF31Q96EP0 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
RNF31Q96EP0 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC14.33□□□□□ -0.12
RNF31Q96EP0 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC14.33□□□□□ -0.12
RNF31Q96EP0 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC14.33□□□□□ -0.12
RNF31Q96EP0 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RNF31Q96EP0 NKG7-204ENST00000595217 816 ntTSL 2 BASIC14.33□□□□□ -0.12
RNF31Q96EP0 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
RNF31Q96EP0 AC007663.3-201ENST00000609632 465 ntBASIC14.33□□□□□ -0.12
RNF31Q96EP0 PPA1-206ENST00000625364 644 ntTSL 5 BASIC14.33□□□□□ -0.12
RNF31Q96EP0 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RNF31Q96EP0 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RNF31Q96EP0 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
RNF31Q96EP0 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
RNF31Q96EP0 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RNF31Q96EP0 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
RNF31Q96EP0 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
RNF31Q96EP0 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RNF31Q96EP0 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
RNF31Q96EP0 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RNF31Q96EP0 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RNF31Q96EP0 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RNF31Q96EP0 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC14.33□□□□□ -0.12
RNF31Q96EP0 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RNF31Q96EP0 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RNF31Q96EP0 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RNF31Q96EP0 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC14.33□□□□□ -0.12
RNF31Q96EP0 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC14.32□□□□□ -0.12
RNF31Q96EP0 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC14.32□□□□□ -0.12
RNF31Q96EP0 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC14.32□□□□□ -0.12
RNF31Q96EP0 LINC00552-201ENST00000625151 2579 ntBASIC14.32□□□□□ -0.12
RNF31Q96EP0 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RNF31Q96EP0 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC14.32□□□□□ -0.12
RNF31Q96EP0 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
RNF31Q96EP0 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RNF31Q96EP0 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RNF31Q96EP0 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC14.32□□□□□ -0.12
RNF31Q96EP0 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms