Protein–RNA interactions for Protein: Q8TC90

CCER1, Coiled-coil domain-containing glutamate-rich protein 1, humanhuman

Predicted RBP Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCER1Q8TC90 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC22.14■■□□□ 1.13
CCER1Q8TC90 AC098850.1-201ENST00000419919 790 ntBASIC22.14■■□□□ 1.13
CCER1Q8TC90 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
CCER1Q8TC90 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC22.14■■□□□ 1.13
CCER1Q8TC90 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC22.14■■□□□ 1.13
CCER1Q8TC90 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC22.14■■□□□ 1.13
CCER1Q8TC90 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
CCER1Q8TC90 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC22.14■■□□□ 1.13
CCER1Q8TC90 AC092364.2-202ENST00000597012 1073 ntBASIC22.14■■□□□ 1.13
CCER1Q8TC90 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC22.14■■□□□ 1.13
CCER1Q8TC90 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
CCER1Q8TC90 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC22.14■■□□□ 1.13
CCER1Q8TC90 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC22.14■■□□□ 1.13
CCER1Q8TC90 LRRC59-203ENST00000576448 1531 ntBASIC22.14■■□□□ 1.13
CCER1Q8TC90 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC22.14■■□□□ 1.13
CCER1Q8TC90 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC22.14■■□□□ 1.13
CCER1Q8TC90 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC22.14■■□□□ 1.13
CCER1Q8TC90 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.13
CCER1Q8TC90 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC22.14■■□□□ 1.13
CCER1Q8TC90 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
CCER1Q8TC90 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
CCER1Q8TC90 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC22.14■■□□□ 1.13
CCER1Q8TC90 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC22.13■■□□□ 1.13
CCER1Q8TC90 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
CCER1Q8TC90 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
CCER1Q8TC90 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
CCER1Q8TC90 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CCER1Q8TC90 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC22.13■■□□□ 1.13
CCER1Q8TC90 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC22.13■■□□□ 1.13
CCER1Q8TC90 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC22.13■■□□□ 1.13
CCER1Q8TC90 MAPT-IT1-201ENST00000624111 3016 ntBASIC22.13■■□□□ 1.13
CCER1Q8TC90 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
CCER1Q8TC90 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC22.13■■□□□ 1.13
CCER1Q8TC90 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CCER1Q8TC90 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC22.13■■□□□ 1.13
CCER1Q8TC90 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC22.13■■□□□ 1.13
CCER1Q8TC90 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CCER1Q8TC90 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CCER1Q8TC90 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CCER1Q8TC90 GIMAP3P-201ENST00000495150 836 ntBASIC22.13■■□□□ 1.13
CCER1Q8TC90 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC22.13■■□□□ 1.13
CCER1Q8TC90 AC055876.2-201ENST00000531834 546 ntBASIC22.13■■□□□ 1.13
CCER1Q8TC90 DUT-210ENST00000559935 569 ntTSL 3 BASIC22.13■■□□□ 1.13
CCER1Q8TC90 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC22.13■■□□□ 1.13
CCER1Q8TC90 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC22.13■■□□□ 1.13
CCER1Q8TC90 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
CCER1Q8TC90 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC22.13■■□□□ 1.13
CCER1Q8TC90 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC22.13■■□□□ 1.13
CCER1Q8TC90 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC22.13■■□□□ 1.13
CCER1Q8TC90 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC22.13■■□□□ 1.13
CCER1Q8TC90 AGER-206ENST00000375070 1463 ntTSL 5 BASIC22.13■■□□□ 1.13
CCER1Q8TC90 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
CCER1Q8TC90 AC020910.6-201ENST00000623084 1459 ntBASIC22.13■■□□□ 1.13
CCER1Q8TC90 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC22.13■■□□□ 1.13
CCER1Q8TC90 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
CCER1Q8TC90 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC22.13■■□□□ 1.13
CCER1Q8TC90 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC22.13■■□□□ 1.13
CCER1Q8TC90 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CCER1Q8TC90 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CCER1Q8TC90 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC22.13■■□□□ 1.13
CCER1Q8TC90 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
CCER1Q8TC90 WARS-203ENST00000358655 2466 ntTSL 2 BASIC22.13■■□□□ 1.13
CCER1Q8TC90 AC215219.1-201ENST00000400706 1817 ntBASIC22.13■■□□□ 1.13
CCER1Q8TC90 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CCER1Q8TC90 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC22.12■■□□□ 1.13
CCER1Q8TC90 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC22.12■■□□□ 1.13
CCER1Q8TC90 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
CCER1Q8TC90 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
CCER1Q8TC90 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
CCER1Q8TC90 LSS-211ENST00000522411 2523 ntTSL 2 BASIC22.12■■□□□ 1.13
CCER1Q8TC90 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
CCER1Q8TC90 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
CCER1Q8TC90 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
CCER1Q8TC90 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
CCER1Q8TC90 PNMT-202ENST00000394246 821 ntTSL 2 BASIC22.12■■□□□ 1.13
CCER1Q8TC90 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC22.12■■□□□ 1.13
CCER1Q8TC90 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
CCER1Q8TC90 AC092552.1-201ENST00000547243 906 ntBASIC22.12■■□□□ 1.13
CCER1Q8TC90 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC22.12■■□□□ 1.13
CCER1Q8TC90 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
CCER1Q8TC90 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
CCER1Q8TC90 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC22.12■■□□□ 1.13
CCER1Q8TC90 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC22.12■■□□□ 1.13
CCER1Q8TC90 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC22.12■■□□□ 1.13
CCER1Q8TC90 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
CCER1Q8TC90 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC22.12■■□□□ 1.13
CCER1Q8TC90 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
CCER1Q8TC90 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC22.12■■□□□ 1.13
CCER1Q8TC90 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC22.12■■□□□ 1.13
CCER1Q8TC90 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC22.12■■□□□ 1.13
CCER1Q8TC90 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
CCER1Q8TC90 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC22.12■■□□□ 1.13
CCER1Q8TC90 AC130686.1-201ENST00000622936 2466 ntBASIC22.12■■□□□ 1.13
CCER1Q8TC90 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC22.11■■□□□ 1.13
CCER1Q8TC90 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CCER1Q8TC90 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC22.11■■□□□ 1.13
CCER1Q8TC90 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC22.11■■□□□ 1.13
CCER1Q8TC90 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC22.11■■□□□ 1.13
CCER1Q8TC90 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC22.11■■□□□ 1.13
CCER1Q8TC90 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 68.4 ms