Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 MBLAC2-202ENST00000514906 1936 ntBASIC15.51■□□□□ 0.07
SHKBP1Q8TBC3 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SHKBP1Q8TBC3 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
SHKBP1Q8TBC3 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC15.5■□□□□ 0.07
SHKBP1Q8TBC3 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
SHKBP1Q8TBC3 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SHKBP1Q8TBC3 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SHKBP1Q8TBC3 LINC01101-201ENST00000622953 1884 ntBASIC15.5■□□□□ 0.07
SHKBP1Q8TBC3 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC15.5■□□□□ 0.07
SHKBP1Q8TBC3 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC15.5■□□□□ 0.07
SHKBP1Q8TBC3 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
SHKBP1Q8TBC3 MROH4P-201ENST00000431302 1578 ntBASIC15.5■□□□□ 0.07
SHKBP1Q8TBC3 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SHKBP1Q8TBC3 AL008718.2-201ENST00000609206 1313 ntBASIC15.5■□□□□ 0.07
SHKBP1Q8TBC3 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC15.5■□□□□ 0.07
SHKBP1Q8TBC3 ING5-213ENST00000636051 4199 ntTSL 5 BASIC15.5■□□□□ 0.07
SHKBP1Q8TBC3 AL390755.1-201ENST00000623716 2027 ntBASIC15.5■□□□□ 0.07
SHKBP1Q8TBC3 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SHKBP1Q8TBC3 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
SHKBP1Q8TBC3 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC15.5■□□□□ 0.07
SHKBP1Q8TBC3 AC126365.1-201ENST00000578585 1514 ntBASIC15.5■□□□□ 0.07
SHKBP1Q8TBC3 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SHKBP1Q8TBC3 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SHKBP1Q8TBC3 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC15.5■□□□□ 0.07
SHKBP1Q8TBC3 HINT2P1-201ENST00000419438 481 ntBASIC15.5■□□□□ 0.07
SHKBP1Q8TBC3 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC15.5■□□□□ 0.07
SHKBP1Q8TBC3 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
SHKBP1Q8TBC3 AC012441.2-201ENST00000444843 739 ntBASIC15.5■□□□□ 0.07
SHKBP1Q8TBC3 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC15.5■□□□□ 0.07
SHKBP1Q8TBC3 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC15.5■□□□□ 0.07
SHKBP1Q8TBC3 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC15.5■□□□□ 0.07
SHKBP1Q8TBC3 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
SHKBP1Q8TBC3 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC15.5■□□□□ 0.07
SHKBP1Q8TBC3 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
SHKBP1Q8TBC3 AL133499.1-201ENST00000596207 608 ntBASIC15.5■□□□□ 0.07
SHKBP1Q8TBC3 AL132994.2-201ENST00000603120 687 ntBASIC15.5■□□□□ 0.07
SHKBP1Q8TBC3 AC079336.7-201ENST00000623428 1078 ntBASIC15.5■□□□□ 0.07
SHKBP1Q8TBC3 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC15.5■□□□□ 0.07
SHKBP1Q8TBC3 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SHKBP1Q8TBC3 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SHKBP1Q8TBC3 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
SHKBP1Q8TBC3 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
SHKBP1Q8TBC3 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
SHKBP1Q8TBC3 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SHKBP1Q8TBC3 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SHKBP1Q8TBC3 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
SHKBP1Q8TBC3 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SHKBP1Q8TBC3 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
SHKBP1Q8TBC3 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SHKBP1Q8TBC3 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SHKBP1Q8TBC3 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
SHKBP1Q8TBC3 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
SHKBP1Q8TBC3 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC15.49■□□□□ 0.07
SHKBP1Q8TBC3 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC15.49■□□□□ 0.07
SHKBP1Q8TBC3 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
SHKBP1Q8TBC3 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
SHKBP1Q8TBC3 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
SHKBP1Q8TBC3 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC15.49■□□□□ 0.07
SHKBP1Q8TBC3 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SHKBP1Q8TBC3 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
SHKBP1Q8TBC3 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
SHKBP1Q8TBC3 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
SHKBP1Q8TBC3 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SHKBP1Q8TBC3 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SHKBP1Q8TBC3 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SHKBP1Q8TBC3 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
SHKBP1Q8TBC3 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SHKBP1Q8TBC3 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
SHKBP1Q8TBC3 RN7SKP214-201ENST00000364208 315 ntBASIC15.49■□□□□ 0.07
SHKBP1Q8TBC3 HNRNPA1P41-201ENST00000397777 928 ntBASIC15.49■□□□□ 0.07
SHKBP1Q8TBC3 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
SHKBP1Q8TBC3 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC15.49■□□□□ 0.07
SHKBP1Q8TBC3 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC15.49■□□□□ 0.07
SHKBP1Q8TBC3 SCARNA21-201ENST00000517026 139 ntBASIC15.49■□□□□ 0.07
SHKBP1Q8TBC3 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC15.49■□□□□ 0.07
SHKBP1Q8TBC3 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
SHKBP1Q8TBC3 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
SHKBP1Q8TBC3 AC009779.1-201ENST00000551138 283 ntBASIC15.49■□□□□ 0.07
SHKBP1Q8TBC3 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC15.49■□□□□ 0.07
SHKBP1Q8TBC3 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
SHKBP1Q8TBC3 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC15.49■□□□□ 0.07
SHKBP1Q8TBC3 AC005962.1-201ENST00000584100 773 ntBASIC15.49■□□□□ 0.07
SHKBP1Q8TBC3 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
SHKBP1Q8TBC3 Z98259.2-201ENST00000641583 609 ntBASIC15.49■□□□□ 0.07
SHKBP1Q8TBC3 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SHKBP1Q8TBC3 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
SHKBP1Q8TBC3 AMT-204ENST00000427987 1646 ntTSL 5 BASIC15.49■□□□□ 0.07
SHKBP1Q8TBC3 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC15.49■□□□□ 0.07
SHKBP1Q8TBC3 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC15.49■□□□□ 0.07
SHKBP1Q8TBC3 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC15.49■□□□□ 0.07
SHKBP1Q8TBC3 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SHKBP1Q8TBC3 SALL4P5-201ENST00000419001 1760 ntBASIC15.49■□□□□ 0.07
SHKBP1Q8TBC3 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SHKBP1Q8TBC3 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
SHKBP1Q8TBC3 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC15.49■□□□□ 0.07
SHKBP1Q8TBC3 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
SHKBP1Q8TBC3 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
SHKBP1Q8TBC3 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
SHKBP1Q8TBC3 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SHKBP1Q8TBC3 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms