Protein–RNA interactions for Protein: Q8NHU2

CFAP61, Cilia- and flagella-associated protein 61, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP61Q8NHU2 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC15.1■□□□□ 0.01
CFAP61Q8NHU2 AC092552.1-201ENST00000547243 906 ntBASIC15.1■□□□□ 0.01
CFAP61Q8NHU2 WASH4P-201ENST00000564273 1246 ntBASIC15.1■□□□□ 0.01
CFAP61Q8NHU2 CTBP2P3-201ENST00000585629 1255 ntBASIC15.1■□□□□ 0.01
CFAP61Q8NHU2 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC15.1■□□□□ 0.01
CFAP61Q8NHU2 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CFAP61Q8NHU2 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC15.1■□□□□ 0.01
CFAP61Q8NHU2 AC107373.2-201ENST00000607735 490 ntBASIC15.1■□□□□ 0.01
CFAP61Q8NHU2 AL662799.1-202ENST00000614205 422 ntBASIC15.1■□□□□ 0.01
CFAP61Q8NHU2 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC15.1■□□□□ 0.01
CFAP61Q8NHU2 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC15.1■□□□□ 0.01
CFAP61Q8NHU2 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC15.1■□□□□ 0.01
CFAP61Q8NHU2 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC15.1■□□□□ 0.01
CFAP61Q8NHU2 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
CFAP61Q8NHU2 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC15.1■□□□□ 0.01
CFAP61Q8NHU2 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CFAP61Q8NHU2 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CFAP61Q8NHU2 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
CFAP61Q8NHU2 RET-205ENST00000615310 4337 ntTSL 5 BASIC15.1■□□□□ 0.01
CFAP61Q8NHU2 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
CFAP61Q8NHU2 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CFAP61Q8NHU2 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC15.1■□□□□ 0.01
CFAP61Q8NHU2 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
CFAP61Q8NHU2 MTHFR-210ENST00000641407 2387 ntBASIC15.1■□□□□ 0.01
CFAP61Q8NHU2 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
CFAP61Q8NHU2 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CFAP61Q8NHU2 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CFAP61Q8NHU2 DRD5P1-201ENST00000456605 1438 ntBASIC15.09■□□□□ 0.01
CFAP61Q8NHU2 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
CFAP61Q8NHU2 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CFAP61Q8NHU2 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CFAP61Q8NHU2 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC15.09■□□□□ 0.01
CFAP61Q8NHU2 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CFAP61Q8NHU2 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC15.09■□□□□ 0.01
CFAP61Q8NHU2 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CFAP61Q8NHU2 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CFAP61Q8NHU2 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC15.09■□□□□ 0.01
CFAP61Q8NHU2 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC15.09■□□□□ 0.01
CFAP61Q8NHU2 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CFAP61Q8NHU2 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CFAP61Q8NHU2 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
CFAP61Q8NHU2 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CFAP61Q8NHU2 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
CFAP61Q8NHU2 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC15.09■□□□□ 0.01
CFAP61Q8NHU2 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
CFAP61Q8NHU2 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CFAP61Q8NHU2 DGCR5-201ENST00000399539 862 ntBASIC15.09■□□□□ 0.01
CFAP61Q8NHU2 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CFAP61Q8NHU2 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CFAP61Q8NHU2 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CFAP61Q8NHU2 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC15.09■□□□□ 0.01
CFAP61Q8NHU2 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC15.09■□□□□ 0.01
CFAP61Q8NHU2 AL359711.2-201ENST00000563105 872 ntBASIC15.09■□□□□ 0.01
CFAP61Q8NHU2 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC15.09■□□□□ 0.01
CFAP61Q8NHU2 TP53TG3HP-202ENST00000569755 579 ntBASIC15.09■□□□□ 0.01
CFAP61Q8NHU2 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC15.09■□□□□ 0.01
CFAP61Q8NHU2 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC15.09■□□□□ 0.01
CFAP61Q8NHU2 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC15.09■□□□□ 0.01
CFAP61Q8NHU2 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CFAP61Q8NHU2 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC15.09■□□□□ 0.01
CFAP61Q8NHU2 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CFAP61Q8NHU2 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC15.09■□□□□ 0.01
CFAP61Q8NHU2 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC15.09■□□□□ 0.01
CFAP61Q8NHU2 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CFAP61Q8NHU2 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
CFAP61Q8NHU2 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
CFAP61Q8NHU2 STAB1-201ENST00000321725 7928 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CFAP61Q8NHU2 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CFAP61Q8NHU2 ACE3P-201ENST00000423435 1973 ntBASIC15.09■□□□□ 0.01
CFAP61Q8NHU2 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CFAP61Q8NHU2 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC15.09■□□□□ 0.01
CFAP61Q8NHU2 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CFAP61Q8NHU2 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CFAP61Q8NHU2 INTS4P2-202ENST00000614726 2019 ntBASIC15.09■□□□□ 0.01
CFAP61Q8NHU2 CES1P1-201ENST00000421606 1704 ntBASIC15.09■□□□□ 0.01
CFAP61Q8NHU2 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CFAP61Q8NHU2 PPT1-213ENST00000641319 2388 ntBASIC15.09■□□□□ 0.01
CFAP61Q8NHU2 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0.01
CFAP61Q8NHU2 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
CFAP61Q8NHU2 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0.01
CFAP61Q8NHU2 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC15.08■□□□□ 0.01
CFAP61Q8NHU2 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
CFAP61Q8NHU2 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
CFAP61Q8NHU2 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC15.08■□□□□ 0
CFAP61Q8NHU2 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
CFAP61Q8NHU2 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CFAP61Q8NHU2 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CFAP61Q8NHU2 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC15.08■□□□□ 0
CFAP61Q8NHU2 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC15.08■□□□□ 0
CFAP61Q8NHU2 AC015909.5-201ENST00000624336 2266 ntBASIC15.08■□□□□ 0
CFAP61Q8NHU2 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC15.08■□□□□ 0
CFAP61Q8NHU2 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC15.08■□□□□ 0
CFAP61Q8NHU2 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC15.08■□□□□ 0
CFAP61Q8NHU2 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
CFAP61Q8NHU2 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC15.08■□□□□ 0
CFAP61Q8NHU2 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CFAP61Q8NHU2 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
CFAP61Q8NHU2 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CFAP61Q8NHU2 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC15.08■□□□□ 0
CFAP61Q8NHU2 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 94.4 ms