Protein–RNA interactions for Protein: Q8N9L1

ZIC4, Zinc finger protein ZIC 4, humanhuman

Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4Q8N9L1 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
ZIC4Q8N9L1 MIR663B-201ENST00000408361 115 ntBASIC13.03□□□□□ -0.32
ZIC4Q8N9L1 MIR1908-201ENST00000410394 80 ntBASIC13.03□□□□□ -0.32
ZIC4Q8N9L1 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC13.03□□□□□ -0.32
ZIC4Q8N9L1 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC13.03□□□□□ -0.32
ZIC4Q8N9L1 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC13.03□□□□□ -0.32
ZIC4Q8N9L1 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC13.03□□□□□ -0.32
ZIC4Q8N9L1 AL157407.1-201ENST00000435784 904 ntBASIC13.03□□□□□ -0.32
ZIC4Q8N9L1 AL645933.1-201ENST00000440087 609 ntBASIC13.03□□□□□ -0.32
ZIC4Q8N9L1 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC13.03□□□□□ -0.32
ZIC4Q8N9L1 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
ZIC4Q8N9L1 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ZIC4Q8N9L1 HNRNPA1P36-201ENST00000521313 955 ntBASIC13.03□□□□□ -0.32
ZIC4Q8N9L1 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
ZIC4Q8N9L1 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC13.03□□□□□ -0.32
ZIC4Q8N9L1 RIT1-205ENST00000539040 919 ntTSL 2 BASIC13.03□□□□□ -0.32
ZIC4Q8N9L1 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ZIC4Q8N9L1 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC13.03□□□□□ -0.32
ZIC4Q8N9L1 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC13.03□□□□□ -0.32
ZIC4Q8N9L1 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC13.03□□□□□ -0.32
ZIC4Q8N9L1 MIR6720-201ENST00000611664 98 ntBASIC13.03□□□□□ -0.32
ZIC4Q8N9L1 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
ZIC4Q8N9L1 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ZIC4Q8N9L1 AC090505.1-201ENST00000430515 1834 ntBASIC13.03□□□□□ -0.32
ZIC4Q8N9L1 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ZIC4Q8N9L1 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
ZIC4Q8N9L1 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
ZIC4Q8N9L1 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ZIC4Q8N9L1 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ZIC4Q8N9L1 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ZIC4Q8N9L1 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
ZIC4Q8N9L1 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
ZIC4Q8N9L1 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC13.03□□□□□ -0.32
ZIC4Q8N9L1 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
ZIC4Q8N9L1 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ZIC4Q8N9L1 REXO1L6P-201ENST00000603433 1515 ntBASIC13.03□□□□□ -0.32
ZIC4Q8N9L1 TMBIM7P-202ENST00000641474 1516 ntBASIC13.03□□□□□ -0.32
ZIC4Q8N9L1 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC13.03□□□□□ -0.32
ZIC4Q8N9L1 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
ZIC4Q8N9L1 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC13.03□□□□□ -0.32
ZIC4Q8N9L1 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC13.02□□□□□ -0.32
ZIC4Q8N9L1 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
ZIC4Q8N9L1 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
ZIC4Q8N9L1 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
ZIC4Q8N9L1 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
ZIC4Q8N9L1 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
ZIC4Q8N9L1 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
ZIC4Q8N9L1 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
ZIC4Q8N9L1 RN7SL832P-201ENST00000607781 1756 ntBASIC13.02□□□□□ -0.32
ZIC4Q8N9L1 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC13.02□□□□□ -0.32
ZIC4Q8N9L1 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
ZIC4Q8N9L1 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
ZIC4Q8N9L1 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
ZIC4Q8N9L1 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC13.02□□□□□ -0.32
ZIC4Q8N9L1 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC13.02□□□□□ -0.32
ZIC4Q8N9L1 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
ZIC4Q8N9L1 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
ZIC4Q8N9L1 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
ZIC4Q8N9L1 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC13.02□□□□□ -0.33
ZIC4Q8N9L1 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC13.02□□□□□ -0.33
ZIC4Q8N9L1 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
ZIC4Q8N9L1 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
ZIC4Q8N9L1 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
ZIC4Q8N9L1 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
ZIC4Q8N9L1 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC13.02□□□□□ -0.33
ZIC4Q8N9L1 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC13.02□□□□□ -0.33
ZIC4Q8N9L1 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
ZIC4Q8N9L1 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC13.02□□□□□ -0.33
ZIC4Q8N9L1 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC13.02□□□□□ -0.33
ZIC4Q8N9L1 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
ZIC4Q8N9L1 SORD2P-201ENST00000558556 1069 ntBASIC13.02□□□□□ -0.33
ZIC4Q8N9L1 AC100827.2-201ENST00000563214 1194 ntBASIC13.02□□□□□ -0.33
ZIC4Q8N9L1 AC005730.2-201ENST00000564549 1184 ntBASIC13.02□□□□□ -0.33
ZIC4Q8N9L1 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
ZIC4Q8N9L1 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
ZIC4Q8N9L1 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
ZIC4Q8N9L1 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC13.02□□□□□ -0.33
ZIC4Q8N9L1 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC13.02□□□□□ -0.33
ZIC4Q8N9L1 Z98259.2-201ENST00000641583 609 ntBASIC13.02□□□□□ -0.33
ZIC4Q8N9L1 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC13.02□□□□□ -0.33
ZIC4Q8N9L1 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
ZIC4Q8N9L1 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC13.02□□□□□ -0.33
ZIC4Q8N9L1 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC13.02□□□□□ -0.33
ZIC4Q8N9L1 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
ZIC4Q8N9L1 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC13.02□□□□□ -0.33
ZIC4Q8N9L1 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC13.02□□□□□ -0.33
ZIC4Q8N9L1 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC13.02□□□□□ -0.33
ZIC4Q8N9L1 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
ZIC4Q8N9L1 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
ZIC4Q8N9L1 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
ZIC4Q8N9L1 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
ZIC4Q8N9L1 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC13.02□□□□□ -0.33
ZIC4Q8N9L1 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
ZIC4Q8N9L1 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
ZIC4Q8N9L1 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
ZIC4Q8N9L1 ADK-205ENST00000539909 1866 ntTSL 2 BASIC13.02□□□□□ -0.33
ZIC4Q8N9L1 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC13.02□□□□□ -0.33
ZIC4Q8N9L1 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC13.01□□□□□ -0.33
ZIC4Q8N9L1 AMT-239ENST00000636865 1914 ntTSL 5 BASIC13.01□□□□□ -0.33
ZIC4Q8N9L1 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms