Protein–RNA interactions for Protein: Q8N2S1

LTBP4, Latent-transforming growth factor beta-binding protein 4, humanhuman

Predictions only

Length 1,624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4Q8N2S1 ART3-201ENST00000341029 1517 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
LTBP4Q8N2S1 CPA5-206ENST00000474905 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LTBP4Q8N2S1 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
LTBP4Q8N2S1 TPM3P7-201ENST00000338274 732 ntBASIC19.51■□□□□ 0.71
LTBP4Q8N2S1 BTF3-202ENST00000380591 1237 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
LTBP4Q8N2S1 FAM25E-201ENST00000411791 322 ntTSL 3 BASIC19.51■□□□□ 0.71
LTBP4Q8N2S1 IDI2-AS1-204ENST00000437374 896 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
LTBP4Q8N2S1 MAP1LC3BP1-202ENST00000438342 516 ntTSL 3 BASIC19.51■□□□□ 0.71
LTBP4Q8N2S1 AC012066.1-201ENST00000439252 694 ntBASIC19.51■□□□□ 0.71
LTBP4Q8N2S1 LINC02344-201ENST00000443576 644 ntTSL 2 BASIC19.51■□□□□ 0.71
LTBP4Q8N2S1 GOLT1B-206ENST00000542038 933 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
LTBP4Q8N2S1 HERC2P5-202ENST00000564458 1164 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
LTBP4Q8N2S1 HERC2P8-203ENST00000564795 1164 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
LTBP4Q8N2S1 GABARAPL2-203ENST00000565057 571 ntTSL 2 BASIC19.51■□□□□ 0.71
LTBP4Q8N2S1 MIR22HG-206ENST00000573127 899 ntTSL 3 BASIC19.51■□□□□ 0.71
LTBP4Q8N2S1 LINC00514-203ENST00000573465 313 ntTSL 5 BASIC19.51■□□□□ 0.71
LTBP4Q8N2S1 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
LTBP4Q8N2S1 AL590491.2-202ENST00000611126 418 ntTSL 5 BASIC19.51■□□□□ 0.71
LTBP4Q8N2S1 Metazoa_SRP.153-201ENST00000620153 341 ntBASIC19.51■□□□□ 0.71
LTBP4Q8N2S1 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC19.51■□□□□ 0.71
LTBP4Q8N2S1 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC19.51■□□□□ 0.71
LTBP4Q8N2S1 NEK3-210ENST00000620675 2072 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
LTBP4Q8N2S1 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC19.51■□□□□ 0.71
LTBP4Q8N2S1 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC19.51■□□□□ 0.71
LTBP4Q8N2S1 DEGS1-202ENST00000391877 1345 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
LTBP4Q8N2S1 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LTBP4Q8N2S1 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LTBP4Q8N2S1 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LTBP4Q8N2S1 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LTBP4Q8N2S1 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
LTBP4Q8N2S1 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
LTBP4Q8N2S1 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LTBP4Q8N2S1 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
LTBP4Q8N2S1 SNRPN-205ENST00000400100 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LTBP4Q8N2S1 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC19.51■□□□□ 0.71
LTBP4Q8N2S1 PDZD11-201ENST00000239666 1043 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LTBP4Q8N2S1 SH3BGR-202ENST00000380631 780 ntTSL 5 BASIC19.51■□□□□ 0.71
LTBP4Q8N2S1 AL391903.1-201ENST00000407513 365 ntBASIC19.51■□□□□ 0.71
LTBP4Q8N2S1 AP005273.1-201ENST00000444862 522 ntTSL 3 BASIC19.51■□□□□ 0.71
LTBP4Q8N2S1 HOXB-AS3-209ENST00000477144 743 ntTSL 5 BASIC19.51■□□□□ 0.71
LTBP4Q8N2S1 CACNA1C-IT3-201ENST00000542680 622 ntTSL 3 BASIC19.51■□□□□ 0.71
LTBP4Q8N2S1 SLC25A3-206ENST00000547534 556 ntTSL 2 BASIC19.51■□□□□ 0.71
LTBP4Q8N2S1 OR5L1-201ENST00000625203 1110 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
LTBP4Q8N2S1 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
LTBP4Q8N2S1 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
LTBP4Q8N2S1 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LTBP4Q8N2S1 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LTBP4Q8N2S1 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LTBP4Q8N2S1 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC19.5■□□□□ 0.71
LTBP4Q8N2S1 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC19.5■□□□□ 0.71
LTBP4Q8N2S1 MARCH9-202ENST00000548358 1668 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
LTBP4Q8N2S1 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LTBP4Q8N2S1 LINC02036-201ENST00000415869 910 ntTSL 3 BASIC19.5■□□□□ 0.71
LTBP4Q8N2S1 ATP6V1B1-AS1-201ENST00000422761 1129 ntTSL 2 BASIC19.5■□□□□ 0.71
LTBP4Q8N2S1 AL049792.1-201ENST00000424708 1262 ntBASIC19.5■□□□□ 0.71
LTBP4Q8N2S1 VSTM1-205ENST00000425006 608 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
LTBP4Q8N2S1 HNRNPA1P3-201ENST00000440968 551 ntBASIC19.5■□□□□ 0.71
LTBP4Q8N2S1 LINC01664-202ENST00000441544 1175 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
LTBP4Q8N2S1 AC136475.1-203ENST00000602756 1034 ntTSL 3 BASIC19.5■□□□□ 0.71
LTBP4Q8N2S1 AL645940.1-201ENST00000606432 594 ntTSL 2 BASIC19.5■□□□□ 0.71
LTBP4Q8N2S1 FXYD4-204ENST00000616495 778 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
LTBP4Q8N2S1 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC19.5■□□□□ 0.71
LTBP4Q8N2S1 ARRDC5-201ENST00000381781 1638 ntAPPRIS P1 TSL 3 BASIC19.5■□□□□ 0.71
LTBP4Q8N2S1 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC19.5■□□□□ 0.71
LTBP4Q8N2S1 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
LTBP4Q8N2S1 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
LTBP4Q8N2S1 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC19.5■□□□□ 0.71
LTBP4Q8N2S1 OR2C1-201ENST00000304936 1406 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
LTBP4Q8N2S1 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC19.49■□□□□ 0.71
LTBP4Q8N2S1 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
LTBP4Q8N2S1 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
LTBP4Q8N2S1 GLB1-203ENST00000399402 2512 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
LTBP4Q8N2S1 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
LTBP4Q8N2S1 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
LTBP4Q8N2S1 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
LTBP4Q8N2S1 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC19.49■□□□□ 0.71
LTBP4Q8N2S1 RBMS3-210ENST00000456853 1394 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
LTBP4Q8N2S1 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
LTBP4Q8N2S1 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LTBP4Q8N2S1 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC19.49■□□□□ 0.71
LTBP4Q8N2S1 AL137077.1-201ENST00000442115 528 ntBASIC19.49■□□□□ 0.71
LTBP4Q8N2S1 AL021391.1-201ENST00000454439 545 ntTSL 4 BASIC19.49■□□□□ 0.71
LTBP4Q8N2S1 HAX1-204ENST00000457918 914 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
LTBP4Q8N2S1 RPL3P9-201ENST00000463217 1183 ntBASIC19.49■□□□□ 0.71
LTBP4Q8N2S1 KRT18P42-201ENST00000505048 1255 ntBASIC19.49■□□□□ 0.71
LTBP4Q8N2S1 AC010551.3-201ENST00000563772 463 ntTSL 5 BASIC19.49■□□□□ 0.71
LTBP4Q8N2S1 LINC00969-253ENST00000625338 804 ntTSL 5 BASIC19.49■□□□□ 0.71
LTBP4Q8N2S1 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC19.49■□□□□ 0.71
LTBP4Q8N2S1 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC19.49■□□□□ 0.71
LTBP4Q8N2S1 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
LTBP4Q8N2S1 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
LTBP4Q8N2S1 AGGF1P2-201ENST00000426656 2106 ntBASIC19.49■□□□□ 0.71
LTBP4Q8N2S1 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LTBP4Q8N2S1 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
LTBP4Q8N2S1 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
LTBP4Q8N2S1 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LTBP4Q8N2S1 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LTBP4Q8N2S1 HRASLS2-201ENST00000255695 742 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
LTBP4Q8N2S1 IGHV1OR15-9-201ENST00000338912 353 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
LTBP4Q8N2S1 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC19.48■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms