Protein–RNA interactions for Protein: Q8IV77

CNGA4, Cyclic nucleotide-gated cation channel alpha-4, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA4Q8IV77 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
CNGA4Q8IV77 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
CNGA4Q8IV77 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC16.11■□□□□ 0.17
CNGA4Q8IV77 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CNGA4Q8IV77 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
CNGA4Q8IV77 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CNGA4Q8IV77 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
CNGA4Q8IV77 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
CNGA4Q8IV77 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CNGA4Q8IV77 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
CNGA4Q8IV77 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CNGA4Q8IV77 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CNGA4Q8IV77 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
CNGA4Q8IV77 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CNGA4Q8IV77 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CNGA4Q8IV77 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CNGA4Q8IV77 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
CNGA4Q8IV77 CICP8-201ENST00000455800 2813 ntBASIC16.1■□□□□ 0.17
CNGA4Q8IV77 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CNGA4Q8IV77 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CNGA4Q8IV77 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CNGA4Q8IV77 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CNGA4Q8IV77 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CNGA4Q8IV77 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CNGA4Q8IV77 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC16.1■□□□□ 0.17
CNGA4Q8IV77 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC16.1■□□□□ 0.17
CNGA4Q8IV77 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC16.1■□□□□ 0.17
CNGA4Q8IV77 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
CNGA4Q8IV77 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CNGA4Q8IV77 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
CNGA4Q8IV77 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC16.1■□□□□ 0.17
CNGA4Q8IV77 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CNGA4Q8IV77 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CNGA4Q8IV77 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC16.1■□□□□ 0.17
CNGA4Q8IV77 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CNGA4Q8IV77 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CNGA4Q8IV77 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
CNGA4Q8IV77 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC16.1■□□□□ 0.17
CNGA4Q8IV77 AC004967.1-201ENST00000453589 447 ntBASIC16.1■□□□□ 0.17
CNGA4Q8IV77 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC16.1■□□□□ 0.17
CNGA4Q8IV77 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC16.1■□□□□ 0.17
CNGA4Q8IV77 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC16.1■□□□□ 0.17
CNGA4Q8IV77 AC004449.1-201ENST00000564240 433 ntBASIC16.1■□□□□ 0.17
CNGA4Q8IV77 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC16.1■□□□□ 0.17
CNGA4Q8IV77 BRI3BPP1-201ENST00000594224 787 ntBASIC16.1■□□□□ 0.17
CNGA4Q8IV77 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC16.1■□□□□ 0.17
CNGA4Q8IV77 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC16.1■□□□□ 0.17
CNGA4Q8IV77 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CNGA4Q8IV77 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
CNGA4Q8IV77 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
CNGA4Q8IV77 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CNGA4Q8IV77 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CNGA4Q8IV77 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CNGA4Q8IV77 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CNGA4Q8IV77 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC16.1■□□□□ 0.17
CNGA4Q8IV77 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
CNGA4Q8IV77 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
CNGA4Q8IV77 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC16.1■□□□□ 0.17
CNGA4Q8IV77 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC16.09■□□□□ 0.17
CNGA4Q8IV77 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC16.09■□□□□ 0.17
CNGA4Q8IV77 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CNGA4Q8IV77 INTS4P2-202ENST00000614726 2019 ntBASIC16.09■□□□□ 0.17
CNGA4Q8IV77 AC111170.3-201ENST00000624282 2464 ntBASIC16.09■□□□□ 0.17
CNGA4Q8IV77 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CNGA4Q8IV77 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CNGA4Q8IV77 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC16.09■□□□□ 0.17
CNGA4Q8IV77 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
CNGA4Q8IV77 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
CNGA4Q8IV77 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CNGA4Q8IV77 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC16.09■□□□□ 0.17
CNGA4Q8IV77 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CNGA4Q8IV77 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CNGA4Q8IV77 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CNGA4Q8IV77 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CNGA4Q8IV77 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
CNGA4Q8IV77 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CNGA4Q8IV77 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CNGA4Q8IV77 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CNGA4Q8IV77 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CNGA4Q8IV77 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC16.09■□□□□ 0.17
CNGA4Q8IV77 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
CNGA4Q8IV77 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC16.09■□□□□ 0.17
CNGA4Q8IV77 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC16.09■□□□□ 0.17
CNGA4Q8IV77 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC16.09■□□□□ 0.17
CNGA4Q8IV77 SPDYE22P-201ENST00000582158 798 ntBASIC16.09■□□□□ 0.17
CNGA4Q8IV77 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC16.09■□□□□ 0.17
CNGA4Q8IV77 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC16.09■□□□□ 0.17
CNGA4Q8IV77 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CNGA4Q8IV77 FAM90A12P-201ENST00000519497 2375 ntBASIC16.09■□□□□ 0.17
CNGA4Q8IV77 FAM90A24P-201ENST00000520792 2369 ntBASIC16.09■□□□□ 0.17
CNGA4Q8IV77 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CNGA4Q8IV77 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CNGA4Q8IV77 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CNGA4Q8IV77 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC16.09■□□□□ 0.17
CNGA4Q8IV77 FOS-202ENST00000535987 1402 ntTSL 2 BASIC16.09■□□□□ 0.17
CNGA4Q8IV77 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC16.09■□□□□ 0.17
CNGA4Q8IV77 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
CNGA4Q8IV77 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
CNGA4Q8IV77 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CNGA4Q8IV77 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms