Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
VRK2Q86Y07 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC13.7□□□□□ -0.22
VRK2Q86Y07 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
VRK2Q86Y07 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
VRK2Q86Y07 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
VRK2Q86Y07 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
VRK2Q86Y07 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
VRK2Q86Y07 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
VRK2Q86Y07 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
VRK2Q86Y07 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
VRK2Q86Y07 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
VRK2Q86Y07 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
VRK2Q86Y07 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
VRK2Q86Y07 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
VRK2Q86Y07 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
VRK2Q86Y07 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
VRK2Q86Y07 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
VRK2Q86Y07 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
VRK2Q86Y07 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC13.7□□□□□ -0.22
VRK2Q86Y07 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
VRK2Q86Y07 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
VRK2Q86Y07 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
VRK2Q86Y07 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
VRK2Q86Y07 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
VRK2Q86Y07 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
VRK2Q86Y07 AL138709.1-201ENST00000614840 1693 ntBASIC13.69□□□□□ -0.22
VRK2Q86Y07 AC215219.1-201ENST00000400706 1817 ntBASIC13.69□□□□□ -0.22
VRK2Q86Y07 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
VRK2Q86Y07 FKBP4P6-201ENST00000457486 1332 ntBASIC13.69□□□□□ -0.22
VRK2Q86Y07 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
VRK2Q86Y07 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
VRK2Q86Y07 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
VRK2Q86Y07 AC016397.2-201ENST00000624848 1985 ntBASIC13.69□□□□□ -0.22
VRK2Q86Y07 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
VRK2Q86Y07 FUK-202ENST00000378912 3925 ntTSL 2 BASIC13.69□□□□□ -0.22
VRK2Q86Y07 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
VRK2Q86Y07 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
VRK2Q86Y07 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
VRK2Q86Y07 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
VRK2Q86Y07 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC13.69□□□□□ -0.22
VRK2Q86Y07 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
VRK2Q86Y07 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
VRK2Q86Y07 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
VRK2Q86Y07 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
VRK2Q86Y07 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
VRK2Q86Y07 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
VRK2Q86Y07 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC13.69□□□□□ -0.22
VRK2Q86Y07 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC13.69□□□□□ -0.22
VRK2Q86Y07 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
VRK2Q86Y07 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
VRK2Q86Y07 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC13.69□□□□□ -0.22
VRK2Q86Y07 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
VRK2Q86Y07 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC13.69□□□□□ -0.22
VRK2Q86Y07 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC13.69□□□□□ -0.22
VRK2Q86Y07 CRB3P1-201ENST00000449338 276 ntBASIC13.69□□□□□ -0.22
VRK2Q86Y07 AL391280.1-201ENST00000506969 1062 ntBASIC13.69□□□□□ -0.22
VRK2Q86Y07 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC13.69□□□□□ -0.22
VRK2Q86Y07 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC13.69□□□□□ -0.22
VRK2Q86Y07 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC13.69□□□□□ -0.22
VRK2Q86Y07 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
VRK2Q86Y07 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
VRK2Q86Y07 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
VRK2Q86Y07 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC13.69□□□□□ -0.22
VRK2Q86Y07 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC13.69□□□□□ -0.22
VRK2Q86Y07 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
VRK2Q86Y07 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
VRK2Q86Y07 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
VRK2Q86Y07 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC13.69□□□□□ -0.22
VRK2Q86Y07 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
VRK2Q86Y07 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
VRK2Q86Y07 AC011498.7-201ENST00000624986 2027 ntBASIC13.69□□□□□ -0.22
VRK2Q86Y07 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
VRK2Q86Y07 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
VRK2Q86Y07 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
VRK2Q86Y07 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
VRK2Q86Y07 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
VRK2Q86Y07 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC13.69□□□□□ -0.22
VRK2Q86Y07 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
VRK2Q86Y07 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
VRK2Q86Y07 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
VRK2Q86Y07 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
VRK2Q86Y07 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
VRK2Q86Y07 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
VRK2Q86Y07 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
VRK2Q86Y07 CICP16-201ENST00000502609 2813 ntBASIC13.68□□□□□ -0.22
VRK2Q86Y07 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC13.68□□□□□ -0.22
VRK2Q86Y07 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
VRK2Q86Y07 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
VRK2Q86Y07 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC13.68□□□□□ -0.22
VRK2Q86Y07 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
VRK2Q86Y07 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC13.68□□□□□ -0.22
VRK2Q86Y07 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
VRK2Q86Y07 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
VRK2Q86Y07 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
VRK2Q86Y07 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
VRK2Q86Y07 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
VRK2Q86Y07 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
VRK2Q86Y07 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
VRK2Q86Y07 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
VRK2Q86Y07 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms