Protein–RNA interactions for Protein: Q6ICC9

RTL6, Retrotransposon Gag-like protein 6, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL6Q6ICC9 FGD5P1-202ENST00000614866 2498 ntBASIC13.38□□□□□ -0.27
RTL6Q6ICC9 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RTL6Q6ICC9 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RTL6Q6ICC9 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RTL6Q6ICC9 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
RTL6Q6ICC9 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RTL6Q6ICC9 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC13.38□□□□□ -0.27
RTL6Q6ICC9 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RTL6Q6ICC9 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC13.38□□□□□ -0.27
RTL6Q6ICC9 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
RTL6Q6ICC9 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
RTL6Q6ICC9 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC13.38□□□□□ -0.27
RTL6Q6ICC9 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
RTL6Q6ICC9 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RTL6Q6ICC9 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RTL6Q6ICC9 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RTL6Q6ICC9 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
RTL6Q6ICC9 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
RTL6Q6ICC9 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC13.38□□□□□ -0.27
RTL6Q6ICC9 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
RTL6Q6ICC9 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC13.38□□□□□ -0.27
RTL6Q6ICC9 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC13.38□□□□□ -0.27
RTL6Q6ICC9 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC13.38□□□□□ -0.27
RTL6Q6ICC9 EIF4HP1-201ENST00000453115 687 ntBASIC13.38□□□□□ -0.27
RTL6Q6ICC9 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC13.38□□□□□ -0.27
RTL6Q6ICC9 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
RTL6Q6ICC9 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC13.38□□□□□ -0.27
RTL6Q6ICC9 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC13.38□□□□□ -0.27
RTL6Q6ICC9 MIR4783-201ENST00000580343 82 ntBASIC13.38□□□□□ -0.27
RTL6Q6ICC9 NDUFV2P1-201ENST00000596415 907 ntBASIC13.38□□□□□ -0.27
RTL6Q6ICC9 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
RTL6Q6ICC9 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
RTL6Q6ICC9 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC13.38□□□□□ -0.27
RTL6Q6ICC9 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RTL6Q6ICC9 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC13.38□□□□□ -0.27
RTL6Q6ICC9 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC13.38□□□□□ -0.27
RTL6Q6ICC9 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
RTL6Q6ICC9 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
RTL6Q6ICC9 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
RTL6Q6ICC9 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC13.38□□□□□ -0.27
RTL6Q6ICC9 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RTL6Q6ICC9 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RTL6Q6ICC9 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RTL6Q6ICC9 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
RTL6Q6ICC9 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC13.38□□□□□ -0.27
RTL6Q6ICC9 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC13.38□□□□□ -0.27
RTL6Q6ICC9 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC13.38□□□□□ -0.27
RTL6Q6ICC9 AC009093.2-202ENST00000620513 2079 ntBASIC13.38□□□□□ -0.27
RTL6Q6ICC9 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
RTL6Q6ICC9 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
RTL6Q6ICC9 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
RTL6Q6ICC9 AC023024.2-201ENST00000623561 1993 ntBASIC13.38□□□□□ -0.27
RTL6Q6ICC9 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RTL6Q6ICC9 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
RTL6Q6ICC9 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC13.37□□□□□ -0.27
RTL6Q6ICC9 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
RTL6Q6ICC9 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC13.37□□□□□ -0.27
RTL6Q6ICC9 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
RTL6Q6ICC9 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
RTL6Q6ICC9 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RTL6Q6ICC9 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
RTL6Q6ICC9 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC13.37□□□□□ -0.27
RTL6Q6ICC9 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
RTL6Q6ICC9 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
RTL6Q6ICC9 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
RTL6Q6ICC9 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
RTL6Q6ICC9 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
RTL6Q6ICC9 GSN-215ENST00000545652 2428 ntTSL 2 BASIC13.37□□□□□ -0.27
RTL6Q6ICC9 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC13.37□□□□□ -0.27
RTL6Q6ICC9 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
RTL6Q6ICC9 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RTL6Q6ICC9 SDCCAG3P2-201ENST00000326105 1023 ntBASIC13.37□□□□□ -0.27
RTL6Q6ICC9 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC13.37□□□□□ -0.27
RTL6Q6ICC9 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
RTL6Q6ICC9 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC13.37□□□□□ -0.27
RTL6Q6ICC9 DEF8-202ENST00000418391 852 ntTSL 2 BASIC13.37□□□□□ -0.27
RTL6Q6ICC9 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC13.37□□□□□ -0.27
RTL6Q6ICC9 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
RTL6Q6ICC9 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RTL6Q6ICC9 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC13.37□□□□□ -0.27
RTL6Q6ICC9 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC13.37□□□□□ -0.27
RTL6Q6ICC9 AC138696.2-201ENST00000607376 223 ntBASIC13.37□□□□□ -0.27
RTL6Q6ICC9 AC138649.2-201ENST00000615886 705 ntBASIC13.37□□□□□ -0.27
RTL6Q6ICC9 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC13.37□□□□□ -0.27
RTL6Q6ICC9 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC13.37□□□□□ -0.27
RTL6Q6ICC9 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC13.37□□□□□ -0.27
RTL6Q6ICC9 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
RTL6Q6ICC9 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RTL6Q6ICC9 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC13.37□□□□□ -0.27
RTL6Q6ICC9 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
RTL6Q6ICC9 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RTL6Q6ICC9 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RTL6Q6ICC9 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
RTL6Q6ICC9 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
RTL6Q6ICC9 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC13.37□□□□□ -0.27
RTL6Q6ICC9 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RTL6Q6ICC9 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC13.36□□□□□ -0.27
RTL6Q6ICC9 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC13.36□□□□□ -0.27
RTL6Q6ICC9 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RTL6Q6ICC9 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms