Protein–RNA interactions for Protein: Q2M2E3

ODF4, Outer dense fiber protein 4, humanhuman

Predictions only

Length 257 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ODF4Q2M2E3 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
ODF4Q2M2E3 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ODF4Q2M2E3 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ODF4Q2M2E3 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
ODF4Q2M2E3 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
ODF4Q2M2E3 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
ODF4Q2M2E3 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ODF4Q2M2E3 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ODF4Q2M2E3 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
ODF4Q2M2E3 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC13.18□□□□□ -0.3
ODF4Q2M2E3 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC13.18□□□□□ -0.3
ODF4Q2M2E3 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC13.18□□□□□ -0.3
ODF4Q2M2E3 VDAC1P7-201ENST00000462417 847 ntBASIC13.18□□□□□ -0.3
ODF4Q2M2E3 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC13.18□□□□□ -0.3
ODF4Q2M2E3 GAPDHP40-201ENST00000505218 1006 ntBASIC13.18□□□□□ -0.3
ODF4Q2M2E3 ZNF890P-202ENST00000530367 1156 ntBASIC13.18□□□□□ -0.3
ODF4Q2M2E3 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
ODF4Q2M2E3 AC036164.1-201ENST00000570544 333 ntBASIC13.18□□□□□ -0.3
ODF4Q2M2E3 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC13.18□□□□□ -0.3
ODF4Q2M2E3 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC13.18□□□□□ -0.3
ODF4Q2M2E3 SRD5A3P1-201ENST00000603021 949 ntBASIC13.18□□□□□ -0.3
ODF4Q2M2E3 AC008738.7-201ENST00000609744 511 ntBASIC13.18□□□□□ -0.3
ODF4Q2M2E3 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
ODF4Q2M2E3 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
ODF4Q2M2E3 AC004840.1-201ENST00000636359 365 ntBASIC13.18□□□□□ -0.3
ODF4Q2M2E3 AC089987.1-201ENST00000551654 2209 ntBASIC13.18□□□□□ -0.3
ODF4Q2M2E3 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ODF4Q2M2E3 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ODF4Q2M2E3 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
ODF4Q2M2E3 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
ODF4Q2M2E3 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
ODF4Q2M2E3 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ODF4Q2M2E3 RAB18-208ENST00000611151 4931 ntTSL 5 BASIC13.18□□□□□ -0.3
ODF4Q2M2E3 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ODF4Q2M2E3 SLC6A10P-201ENST00000330048 3846 ntTSL 2 BASIC13.18□□□□□ -0.3
ODF4Q2M2E3 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC13.18□□□□□ -0.3
ODF4Q2M2E3 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC13.18□□□□□ -0.3
ODF4Q2M2E3 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
ODF4Q2M2E3 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ODF4Q2M2E3 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
ODF4Q2M2E3 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
ODF4Q2M2E3 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ODF4Q2M2E3 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
ODF4Q2M2E3 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
ODF4Q2M2E3 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
ODF4Q2M2E3 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
ODF4Q2M2E3 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ODF4Q2M2E3 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
ODF4Q2M2E3 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
ODF4Q2M2E3 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
ODF4Q2M2E3 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
ODF4Q2M2E3 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ODF4Q2M2E3 AGL-203ENST00000361915 7368 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ODF4Q2M2E3 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
ODF4Q2M2E3 CYP26B1-201ENST00000001146 4732 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ODF4Q2M2E3 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
ODF4Q2M2E3 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
ODF4Q2M2E3 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
ODF4Q2M2E3 KRT8P14-201ENST00000414254 1442 ntBASIC13.17□□□□□ -0.3
ODF4Q2M2E3 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ODF4Q2M2E3 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ODF4Q2M2E3 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
ODF4Q2M2E3 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
ODF4Q2M2E3 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ODF4Q2M2E3 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
ODF4Q2M2E3 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
ODF4Q2M2E3 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ODF4Q2M2E3 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ODF4Q2M2E3 SUN1-204ENST00000403868 978 ntTSL 2 BASIC13.17□□□□□ -0.3
ODF4Q2M2E3 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC13.17□□□□□ -0.3
ODF4Q2M2E3 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC13.17□□□□□ -0.3
ODF4Q2M2E3 TSSK5P-201ENST00000423978 907 ntBASIC13.17□□□□□ -0.3
ODF4Q2M2E3 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC13.17□□□□□ -0.3
ODF4Q2M2E3 AL353779.1-201ENST00000434793 351 ntBASIC13.17□□□□□ -0.3
ODF4Q2M2E3 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC13.17□□□□□ -0.3
ODF4Q2M2E3 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC13.17□□□□□ -0.3
ODF4Q2M2E3 AC009477.1-201ENST00000452936 217 ntBASIC13.17□□□□□ -0.3
ODF4Q2M2E3 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC13.17□□□□□ -0.3
ODF4Q2M2E3 AC104794.3-201ENST00000566840 1248 ntBASIC13.17□□□□□ -0.3
ODF4Q2M2E3 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC13.17□□□□□ -0.3
ODF4Q2M2E3 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC13.17□□□□□ -0.3
ODF4Q2M2E3 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ODF4Q2M2E3 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
ODF4Q2M2E3 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC13.17□□□□□ -0.3
ODF4Q2M2E3 AGGF1P1-201ENST00000509500 2073 ntBASIC13.17□□□□□ -0.3
ODF4Q2M2E3 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC13.17□□□□□ -0.3
ODF4Q2M2E3 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC13.17□□□□□ -0.3
ODF4Q2M2E3 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
ODF4Q2M2E3 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC13.17□□□□□ -0.3
ODF4Q2M2E3 TMX4-201ENST00000246024 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ODF4Q2M2E3 LAMB2-201ENST00000305544 5643 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ODF4Q2M2E3 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ODF4Q2M2E3 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ODF4Q2M2E3 OLFML2A-203ENST00000373580 6425 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
ODF4Q2M2E3 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
ODF4Q2M2E3 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
ODF4Q2M2E3 DGKD-201ENST00000264057 6297 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
ODF4Q2M2E3 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ODF4Q2M2E3 PI4KA-201ENST00000255882 6752 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ODF4Q2M2E3 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC13.17□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 69.3 ms