Protein–RNA interactions for Protein: Q2M243

CCDC27, Coiled-coil domain-containing protein 27, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC27Q2M243 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
CCDC27Q2M243 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC19.1■□□□□ 0.65
CCDC27Q2M243 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
CCDC27Q2M243 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC27Q2M243 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
CCDC27Q2M243 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
CCDC27Q2M243 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC27Q2M243 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
CCDC27Q2M243 FAM90A7P-201ENST00000382628 1395 ntBASIC19.1■□□□□ 0.65
CCDC27Q2M243 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC27Q2M243 FAM90A23P-201ENST00000400136 1395 ntBASIC19.1■□□□□ 0.65
CCDC27Q2M243 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
CCDC27Q2M243 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC27Q2M243 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
CCDC27Q2M243 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
CCDC27Q2M243 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC19.1■□□□□ 0.65
CCDC27Q2M243 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC27Q2M243 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC27Q2M243 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC19.1■□□□□ 0.65
CCDC27Q2M243 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC19.1■□□□□ 0.65
CCDC27Q2M243 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC27Q2M243 HLA-J-204ENST00000495278 958 ntBASIC19.1■□□□□ 0.65
CCDC27Q2M243 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC19.1■□□□□ 0.65
CCDC27Q2M243 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC19.1■□□□□ 0.65
CCDC27Q2M243 AC005962.1-201ENST00000584100 773 ntBASIC19.1■□□□□ 0.65
CCDC27Q2M243 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC19.1■□□□□ 0.65
CCDC27Q2M243 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC27Q2M243 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC19.1■□□□□ 0.65
CCDC27Q2M243 GOLGA8VP-201ENST00000559009 1798 ntBASIC19.1■□□□□ 0.65
CCDC27Q2M243 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC27Q2M243 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC27Q2M243 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC27Q2M243 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC27Q2M243 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC19.1■□□□□ 0.65
CCDC27Q2M243 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC19.1■□□□□ 0.65
CCDC27Q2M243 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC27Q2M243 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC27Q2M243 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
CCDC27Q2M243 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC27Q2M243 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC27Q2M243 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC27Q2M243 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
CCDC27Q2M243 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC19.09■□□□□ 0.65
CCDC27Q2M243 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC27Q2M243 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC27Q2M243 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC27Q2M243 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
CCDC27Q2M243 AC027601.5-201ENST00000624065 2482 ntBASIC19.09■□□□□ 0.65
CCDC27Q2M243 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC27Q2M243 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC19.09■□□□□ 0.65
CCDC27Q2M243 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC27Q2M243 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
CCDC27Q2M243 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC27Q2M243 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC19.09■□□□□ 0.65
CCDC27Q2M243 RPS3-201ENST00000278572 907 ntTSL 3 BASIC19.09■□□□□ 0.65
CCDC27Q2M243 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC27Q2M243 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC27Q2M243 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC19.09■□□□□ 0.65
CCDC27Q2M243 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC27Q2M243 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC19.09■□□□□ 0.65
CCDC27Q2M243 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC19.09■□□□□ 0.65
CCDC27Q2M243 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC19.09■□□□□ 0.65
CCDC27Q2M243 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC27Q2M243 AC104982.3-201ENST00000581995 514 ntBASIC19.09■□□□□ 0.65
CCDC27Q2M243 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC19.09■□□□□ 0.65
CCDC27Q2M243 AC016397.2-201ENST00000624848 1985 ntBASIC19.09■□□□□ 0.65
CCDC27Q2M243 MBLAC2-202ENST00000514906 1936 ntBASIC19.09■□□□□ 0.65
CCDC27Q2M243 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC19.09■□□□□ 0.65
CCDC27Q2M243 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC27Q2M243 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC27Q2M243 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC19.09■□□□□ 0.65
CCDC27Q2M243 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
CCDC27Q2M243 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC27Q2M243 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC19.09■□□□□ 0.65
CCDC27Q2M243 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC19.08■□□□□ 0.65
CCDC27Q2M243 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC19.08■□□□□ 0.65
CCDC27Q2M243 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CCDC27Q2M243 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC19.08■□□□□ 0.65
CCDC27Q2M243 NORAD-201ENST00000565493 5339 ntBASIC19.08■□□□□ 0.65
CCDC27Q2M243 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CCDC27Q2M243 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CCDC27Q2M243 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CCDC27Q2M243 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC19.08■□□□□ 0.64
CCDC27Q2M243 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC19.08■□□□□ 0.64
CCDC27Q2M243 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
CCDC27Q2M243 KRT18P36-201ENST00000411618 1276 ntBASIC19.08■□□□□ 0.64
CCDC27Q2M243 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC19.08■□□□□ 0.64
CCDC27Q2M243 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC19.08■□□□□ 0.64
CCDC27Q2M243 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC19.08■□□□□ 0.64
CCDC27Q2M243 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CCDC27Q2M243 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
CCDC27Q2M243 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC19.08■□□□□ 0.64
CCDC27Q2M243 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
CCDC27Q2M243 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
CCDC27Q2M243 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
CCDC27Q2M243 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CCDC27Q2M243 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC19.08■□□□□ 0.64
CCDC27Q2M243 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CCDC27Q2M243 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CCDC27Q2M243 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms