Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 RHOQP2-201ENST00000449922 579 ntBASIC14.17□□□□□ -0.14
RSPO4Q2I0M5 DMKN-229ENST00000467637 827 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
RSPO4Q2I0M5 AC008026.2-201ENST00000495438 348 ntBASIC14.17□□□□□ -0.14
RSPO4Q2I0M5 ORAOV1-205ENST00000535657 709 ntAPPRIS P2 TSL 3 BASIC14.17□□□□□ -0.14
RSPO4Q2I0M5 FBXO36P1-201ENST00000579006 471 ntBASIC14.17□□□□□ -0.14
RSPO4Q2I0M5 AL022334.2-201ENST00000610000 484 ntBASIC14.17□□□□□ -0.14
RSPO4Q2I0M5 IDH3A-224ENST00000629769 114 ntTSL 5 BASIC14.17□□□□□ -0.14
RSPO4Q2I0M5 AC011451.3-201ENST00000634951 582 ntTSL 3 BASIC14.17□□□□□ -0.14
RSPO4Q2I0M5 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RSPO4Q2I0M5 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC14.17□□□□□ -0.14
RSPO4Q2I0M5 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC14.17□□□□□ -0.14
RSPO4Q2I0M5 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC14.17□□□□□ -0.14
RSPO4Q2I0M5 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC14.17□□□□□ -0.14
RSPO4Q2I0M5 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RSPO4Q2I0M5 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
RSPO4Q2I0M5 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC14.16□□□□□ -0.14
RSPO4Q2I0M5 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RSPO4Q2I0M5 TEKT4P2-202ENST00000559466 1312 ntBASIC14.16□□□□□ -0.14
RSPO4Q2I0M5 PRMT2-216ENST00000621201 1301 ntTSL 5 BASIC14.16□□□□□ -0.14
RSPO4Q2I0M5 AC007491.1-201ENST00000637560 1306 ntTSL 5 BASIC14.16□□□□□ -0.14
RSPO4Q2I0M5 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
RSPO4Q2I0M5 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RSPO4Q2I0M5 MRPL55-205ENST00000366731 1423 ntTSL 2 BASIC14.16□□□□□ -0.14
RSPO4Q2I0M5 BCCIP-203ENST00000368759 1433 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RSPO4Q2I0M5 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
RSPO4Q2I0M5 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
RSPO4Q2I0M5 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
RSPO4Q2I0M5 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC14.16□□□□□ -0.14
RSPO4Q2I0M5 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
RSPO4Q2I0M5 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC14.16□□□□□ -0.14
RSPO4Q2I0M5 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
RSPO4Q2I0M5 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
RSPO4Q2I0M5 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC14.16□□□□□ -0.14
RSPO4Q2I0M5 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC14.16□□□□□ -0.14
RSPO4Q2I0M5 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RSPO4Q2I0M5 TRBV5-7-201ENST00000390378 343 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
RSPO4Q2I0M5 CHTF8-202ENST00000398235 1073 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
RSPO4Q2I0M5 PPP1R7-205ENST00000404405 1009 ntTSL 3 BASIC14.16□□□□□ -0.14
RSPO4Q2I0M5 SERF2-209ENST00000409646 559 ntTSL 4 BASIC14.16□□□□□ -0.14
RSPO4Q2I0M5 LINC01885-201ENST00000414300 609 ntTSL 4 BASIC14.16□□□□□ -0.14
RSPO4Q2I0M5 AC073869.2-201ENST00000417338 1026 ntBASIC14.16□□□□□ -0.14
RSPO4Q2I0M5 Z82249.1-201ENST00000453866 568 ntTSL 4 BASIC14.16□□□□□ -0.14
RSPO4Q2I0M5 BPIFB5P-201ENST00000457066 1099 ntBASIC14.16□□□□□ -0.14
RSPO4Q2I0M5 AC005486.1-201ENST00000466775 216 ntTSL 3 BASIC14.16□□□□□ -0.14
RSPO4Q2I0M5 RN7SL288P-201ENST00000490496 291 ntBASIC14.16□□□□□ -0.14
RSPO4Q2I0M5 AL928742.1-201ENST00000497397 548 ntTSL 4 BASIC14.16□□□□□ -0.14
RSPO4Q2I0M5 GLUD1P3-201ENST00000507952 896 ntTSL 2 BASIC14.16□□□□□ -0.14
RSPO4Q2I0M5 RNASEK-204ENST00000552039 591 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RSPO4Q2I0M5 AC084262.1-201ENST00000567818 751 ntBASIC14.16□□□□□ -0.14
RSPO4Q2I0M5 ACSM5-206ENST00000575584 1130 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RSPO4Q2I0M5 HNRNPA1P16-201ENST00000575692 955 ntBASIC14.16□□□□□ -0.14
RSPO4Q2I0M5 RBFOX3-206ENST00000582043 1143 ntTSL 5 BASIC14.16□□□□□ -0.14
RSPO4Q2I0M5 AC004466.2-201ENST00000614749 516 ntBASIC14.16□□□□□ -0.14
RSPO4Q2I0M5 AL512324.3-201ENST00000619383 882 ntBASIC14.16□□□□□ -0.14
RSPO4Q2I0M5 LINC00244-201ENST00000625073 613 ntBASIC14.16□□□□□ -0.14
RSPO4Q2I0M5 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC14.16□□□□□ -0.14
RSPO4Q2I0M5 RPF1-201ENST00000370654 1385 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RSPO4Q2I0M5 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
RSPO4Q2I0M5 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC14.16□□□□□ -0.14
RSPO4Q2I0M5 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RSPO4Q2I0M5 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RSPO4Q2I0M5 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC14.16□□□□□ -0.14
RSPO4Q2I0M5 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC14.16□□□□□ -0.14
RSPO4Q2I0M5 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC14.16□□□□□ -0.14
RSPO4Q2I0M5 AL137783.1-201ENST00000623494 1896 ntBASIC14.16□□□□□ -0.14
RSPO4Q2I0M5 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC14.16□□□□□ -0.14
RSPO4Q2I0M5 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RSPO4Q2I0M5 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RSPO4Q2I0M5 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RSPO4Q2I0M5 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RSPO4Q2I0M5 AHCYP4-201ENST00000419201 1315 ntBASIC14.15□□□□□ -0.14
RSPO4Q2I0M5 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RSPO4Q2I0M5 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RSPO4Q2I0M5 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RSPO4Q2I0M5 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RSPO4Q2I0M5 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
RSPO4Q2I0M5 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RSPO4Q2I0M5 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RSPO4Q2I0M5 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
RSPO4Q2I0M5 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RSPO4Q2I0M5 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RSPO4Q2I0M5 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
RSPO4Q2I0M5 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC14.15□□□□□ -0.14
RSPO4Q2I0M5 MST1L-201ENST00000442552 2185 ntBASIC14.15□□□□□ -0.14
RSPO4Q2I0M5 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RSPO4Q2I0M5 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RSPO4Q2I0M5 EFHD1-207ENST00000611312 1490 ntTSL 5 BASIC14.15□□□□□ -0.14
RSPO4Q2I0M5 CR382285.1-201ENST00000625012 1485 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RSPO4Q2I0M5 MRPS28-201ENST00000276585 850 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RSPO4Q2I0M5 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC14.15□□□□□ -0.14
RSPO4Q2I0M5 GULP1-204ENST00000409637 1242 ntTSL 2 BASIC14.15□□□□□ -0.14
RSPO4Q2I0M5 KRT8P30-201ENST00000432100 650 ntBASIC14.15□□□□□ -0.14
RSPO4Q2I0M5 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC14.15□□□□□ -0.14
RSPO4Q2I0M5 TRPC7-AS1-201ENST00000514459 460 ntTSL 3 BASIC14.15□□□□□ -0.14
RSPO4Q2I0M5 IKBKB-223ENST00000522147 954 ntTSL 5 BASIC14.15□□□□□ -0.14
RSPO4Q2I0M5 AP004550.1-201ENST00000532652 514 ntTSL 3 BASIC14.15□□□□□ -0.14
RSPO4Q2I0M5 AC092862.1-201ENST00000541534 533 ntBASIC14.15□□□□□ -0.14
RSPO4Q2I0M5 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RSPO4Q2I0M5 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RSPO4Q2I0M5 AC104590.1-201ENST00000560813 648 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms