Protein–RNA interactions for Protein: Q01118

SCN7A, Sodium channel protein type 7 subunit alpha, humanhuman

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN7AQ01118 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
SCN7AQ01118 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC17.83■□□□□ 0.45
SCN7AQ01118 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SCN7AQ01118 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC17.83■□□□□ 0.45
SCN7AQ01118 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
SCN7AQ01118 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC17.83■□□□□ 0.45
SCN7AQ01118 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SCN7AQ01118 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC17.83■□□□□ 0.44
SCN7AQ01118 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
SCN7AQ01118 ZDHHC6-201ENST00000369404 1721 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SCN7AQ01118 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.44
SCN7AQ01118 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
SCN7AQ01118 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SCN7AQ01118 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC17.83■□□□□ 0.44
SCN7AQ01118 ALDOA-204ENST00000412304 1603 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
SCN7AQ01118 OTOS-201ENST00000319460 566 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
SCN7AQ01118 AC022080.1-201ENST00000366255 781 ntBASIC17.83■□□□□ 0.44
SCN7AQ01118 AL353658.1-201ENST00000436263 789 ntTSL 2 BASIC17.83■□□□□ 0.44
SCN7AQ01118 RN7SL582P-201ENST00000491078 279 ntBASIC17.83■□□□□ 0.44
SCN7AQ01118 BANF1-205ENST00000527348 670 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.44
SCN7AQ01118 SERGEF-208ENST00000528200 1264 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SCN7AQ01118 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC17.83■□□□□ 0.44
SCN7AQ01118 ABHD17AP9-201ENST00000561925 548 ntBASIC17.83■□□□□ 0.44
SCN7AQ01118 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
SCN7AQ01118 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC17.83■□□□□ 0.44
SCN7AQ01118 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC17.83■□□□□ 0.44
SCN7AQ01118 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
SCN7AQ01118 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SCN7AQ01118 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SCN7AQ01118 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC17.82■□□□□ 0.44
SCN7AQ01118 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SCN7AQ01118 AC232323.1-201ENST00000540724 2099 ntBASIC17.82■□□□□ 0.44
SCN7AQ01118 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SCN7AQ01118 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC17.82■□□□□ 0.44
SCN7AQ01118 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
SCN7AQ01118 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC17.82■□□□□ 0.44
SCN7AQ01118 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC17.82■□□□□ 0.44
SCN7AQ01118 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC17.82■□□□□ 0.44
SCN7AQ01118 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC17.82■□□□□ 0.44
SCN7AQ01118 NCF4-202ENST00000397147 1641 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SCN7AQ01118 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SCN7AQ01118 MC5R-201ENST00000324750 1319 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
SCN7AQ01118 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
SCN7AQ01118 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC17.82■□□□□ 0.44
SCN7AQ01118 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SCN7AQ01118 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC17.82■□□□□ 0.44
SCN7AQ01118 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC17.82■□□□□ 0.44
SCN7AQ01118 TMEM95-201ENST00000330767 1169 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
SCN7AQ01118 PIFO-201ENST00000369737 746 ntTSL 2 BASIC17.82■□□□□ 0.44
SCN7AQ01118 ZNRD1-203ENST00000376782 736 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
SCN7AQ01118 CD300LG-203ENST00000377203 1060 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
SCN7AQ01118 DIO1-203ENST00000388876 606 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SCN7AQ01118 RBM4-203ENST00000398692 921 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SCN7AQ01118 AC106869.1-201ENST00000448713 577 ntTSL 4 BASIC17.82■□□□□ 0.44
SCN7AQ01118 BPIFB5P-201ENST00000457066 1099 ntBASIC17.82■□□□□ 0.44
SCN7AQ01118 AC107464.2-201ENST00000502923 569 ntTSL 2 BASIC17.82■□□□□ 0.44
SCN7AQ01118 RBM4-207ENST00000506523 654 ntTSL 3 BASIC17.82■□□□□ 0.44
SCN7AQ01118 DIO1-204ENST00000524406 626 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SCN7AQ01118 DIO1-213ENST00000532493 406 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SCN7AQ01118 DLK1-205ENST00000556051 469 ntTSL 2 BASIC17.82■□□□□ 0.44
SCN7AQ01118 AC003006.1-202ENST00000594684 612 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SCN7AQ01118 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SCN7AQ01118 COQ4-201ENST00000300452 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SCN7AQ01118 LUC7L2-208ENST00000541170 1525 ntTSL 2 BASIC17.82■□□□□ 0.44
SCN7AQ01118 GPI-205ENST00000586425 1799 ntTSL 5 BASIC17.82■□□□□ 0.44
SCN7AQ01118 FDFT1-214ENST00000528812 2013 ntTSL 2 BASIC17.82■□□□□ 0.44
SCN7AQ01118 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SCN7AQ01118 SCAMP1-AS1-201ENST00000421004 1479 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SCN7AQ01118 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC17.82■□□□□ 0.44
SCN7AQ01118 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC17.82■□□□□ 0.44
SCN7AQ01118 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SCN7AQ01118 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC17.82■□□□□ 0.44
SCN7AQ01118 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC17.82■□□□□ 0.44
SCN7AQ01118 ZNF436-AS1-201ENST00000335648 2547 ntBASIC17.82■□□□□ 0.44
SCN7AQ01118 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SCN7AQ01118 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SCN7AQ01118 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
SCN7AQ01118 GOLGA8UP-201ENST00000527159 1755 ntBASIC17.81■□□□□ 0.44
SCN7AQ01118 TCAF2P1-201ENST00000291129 2421 ntBASIC17.81■□□□□ 0.44
SCN7AQ01118 AC018529.2-202ENST00000611482 3087 ntBASIC17.81■□□□□ 0.44
SCN7AQ01118 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC17.81■□□□□ 0.44
SCN7AQ01118 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SCN7AQ01118 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SCN7AQ01118 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SCN7AQ01118 GS1-124K5.4-201ENST00000445681 540 ntTSL 2 BASIC17.81■□□□□ 0.44
SCN7AQ01118 AC068057.1-201ENST00000453322 709 ntTSL 2 BASIC17.81■□□□□ 0.44
SCN7AQ01118 AGPAT5P1-201ENST00000455855 1019 ntBASIC17.81■□□□□ 0.44
SCN7AQ01118 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC17.81■□□□□ 0.44
SCN7AQ01118 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC17.81■□□□□ 0.44
SCN7AQ01118 UBR5-AS1-202ENST00000520820 800 ntTSL 2 BASIC17.81■□□□□ 0.44
SCN7AQ01118 FAM86B3P-203ENST00000523992 854 ntBASIC17.81■□□□□ 0.44
SCN7AQ01118 ANO3-205ENST00000531646 1264 ntTSL 4 BASIC17.81■□□□□ 0.44
SCN7AQ01118 C12orf57-204ENST00000540506 551 ntTSL 2 BASIC17.81■□□□□ 0.44
SCN7AQ01118 AP001029.1-201ENST00000589843 168 ntTSL 3 BASIC17.81■□□□□ 0.44
SCN7AQ01118 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
SCN7AQ01118 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC17.81■□□□□ 0.44
SCN7AQ01118 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
SCN7AQ01118 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SCN7AQ01118 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC17.81■□□□□ 0.44
SCN7AQ01118 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms