Protein–RNA interactions for Protein: P62995

TRA2B, Transformer-2 protein homolog beta, humanhuman

Known RBP Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2BP62995 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TRA2BP62995 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRA2BP62995 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
TRA2BP62995 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRA2BP62995 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC13.93□□□□□ -0.18
TRA2BP62995 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRA2BP62995 HPD-204ENST00000543163 1709 ntTSL 5 BASIC13.93□□□□□ -0.18
TRA2BP62995 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRA2BP62995 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRA2BP62995 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC13.92□□□□□ -0.18
TRA2BP62995 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TRA2BP62995 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TRA2BP62995 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
TRA2BP62995 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRA2BP62995 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC13.92□□□□□ -0.18
TRA2BP62995 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC13.92□□□□□ -0.18
TRA2BP62995 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRA2BP62995 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC13.92□□□□□ -0.18
TRA2BP62995 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
TRA2BP62995 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC13.92□□□□□ -0.18
TRA2BP62995 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TRA2BP62995 RBM38-204ENST00000371219 760 ntTSL 2 BASIC13.92□□□□□ -0.18
TRA2BP62995 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRA2BP62995 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TRA2BP62995 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC13.92□□□□□ -0.18
TRA2BP62995 MPV17-206ENST00000402722 827 ntTSL 3 BASIC13.92□□□□□ -0.18
TRA2BP62995 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC13.92□□□□□ -0.18
TRA2BP62995 USB1-202ENST00000423271 1217 ntTSL 2 BASIC13.92□□□□□ -0.18
TRA2BP62995 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TRA2BP62995 CNN2P10-201ENST00000443067 918 ntBASIC13.92□□□□□ -0.18
TRA2BP62995 PFN2-215ENST00000497148 743 ntTSL 4 BASIC13.92□□□□□ -0.18
TRA2BP62995 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC13.92□□□□□ -0.18
TRA2BP62995 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC13.92□□□□□ -0.18
TRA2BP62995 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
TRA2BP62995 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC13.92□□□□□ -0.18
TRA2BP62995 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC13.92□□□□□ -0.18
TRA2BP62995 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC13.92□□□□□ -0.18
TRA2BP62995 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC13.92□□□□□ -0.18
TRA2BP62995 GSN-209ENST00000449733 2702 ntTSL 2 BASIC13.92□□□□□ -0.18
TRA2BP62995 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
TRA2BP62995 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TRA2BP62995 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRA2BP62995 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRA2BP62995 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
TRA2BP62995 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TRA2BP62995 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TRA2BP62995 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRA2BP62995 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRA2BP62995 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRA2BP62995 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRA2BP62995 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
TRA2BP62995 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRA2BP62995 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRA2BP62995 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC13.92□□□□□ -0.18
TRA2BP62995 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TRA2BP62995 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
TRA2BP62995 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRA2BP62995 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
TRA2BP62995 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRA2BP62995 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
TRA2BP62995 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC13.91□□□□□ -0.18
TRA2BP62995 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC13.91□□□□□ -0.18
TRA2BP62995 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRA2BP62995 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRA2BP62995 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TRA2BP62995 AC139749.1-202ENST00000617529 3139 ntBASIC13.91□□□□□ -0.18
TRA2BP62995 PDIA3P1-201ENST00000471856 1510 ntBASIC13.91□□□□□ -0.18
TRA2BP62995 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TRA2BP62995 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRA2BP62995 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRA2BP62995 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TRA2BP62995 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRA2BP62995 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRA2BP62995 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
TRA2BP62995 MXI1-205ENST00000393134 889 ntTSL 2 BASIC13.91□□□□□ -0.18
TRA2BP62995 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC13.91□□□□□ -0.18
TRA2BP62995 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC13.91□□□□□ -0.18
TRA2BP62995 HOMER2P2-201ENST00000451621 847 ntBASIC13.91□□□□□ -0.18
TRA2BP62995 KLF2P4-201ENST00000451959 1225 ntBASIC13.91□□□□□ -0.18
TRA2BP62995 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
TRA2BP62995 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC13.91□□□□□ -0.18
TRA2BP62995 NCK2-206ENST00000522586 490 ntTSL 5 BASIC13.91□□□□□ -0.18
TRA2BP62995 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
TRA2BP62995 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC13.91□□□□□ -0.18
TRA2BP62995 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TRA2BP62995 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
TRA2BP62995 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC13.91□□□□□ -0.18
TRA2BP62995 AC005586.2-201ENST00000563946 837 ntBASIC13.91□□□□□ -0.18
TRA2BP62995 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC13.91□□□□□ -0.18
TRA2BP62995 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TRA2BP62995 PPY2P-201ENST00000582808 702 ntBASIC13.91□□□□□ -0.18
TRA2BP62995 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TRA2BP62995 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC13.91□□□□□ -0.18
TRA2BP62995 AC008687.7-202ENST00000637404 953 ntBASIC13.91□□□□□ -0.18
TRA2BP62995 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
TRA2BP62995 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TRA2BP62995 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC13.91□□□□□ -0.18
TRA2BP62995 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRA2BP62995 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRA2BP62995 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms