Protein–RNA interactions for Protein: P61129

ZC3H6, Zinc finger CCCH domain-containing protein 6, humanhuman

Known RBP Predictions only

Length 1,189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H6P61129 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ZC3H6P61129 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ZC3H6P61129 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ZC3H6P61129 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC19.42■□□□□ 0.7
ZC3H6P61129 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ZC3H6P61129 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
ZC3H6P61129 RBM4B-201ENST00000310046 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ZC3H6P61129 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
ZC3H6P61129 HCG9-201ENST00000376800 663 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ZC3H6P61129 MBD3L4-201ENST00000381394 775 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ZC3H6P61129 ACTG2-204ENST00000409918 927 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ZC3H6P61129 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC19.42■□□□□ 0.7
ZC3H6P61129 AC156455.1-203ENST00000423999 893 ntTSL 2 BASIC19.42■□□□□ 0.7
ZC3H6P61129 C17orf58-202ENST00000449250 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ZC3H6P61129 AC018638.5-201ENST00000450885 754 ntBASIC19.42■□□□□ 0.7
ZC3H6P61129 RN7SL665P-201ENST00000578793 300 ntBASIC19.42■□□□□ 0.7
ZC3H6P61129 SIGLEC22P-201ENST00000599104 714 ntBASIC19.42■□□□□ 0.7
ZC3H6P61129 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
ZC3H6P61129 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
ZC3H6P61129 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ZC3H6P61129 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC19.42■□□□□ 0.7
ZC3H6P61129 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
ZC3H6P61129 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ZC3H6P61129 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC19.42■□□□□ 0.7
ZC3H6P61129 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
ZC3H6P61129 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ZC3H6P61129 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC19.42■□□□□ 0.7
ZC3H6P61129 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ZC3H6P61129 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
ZC3H6P61129 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ZC3H6P61129 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ZC3H6P61129 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
ZC3H6P61129 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
ZC3H6P61129 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ZC3H6P61129 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ZC3H6P61129 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC19.41■□□□□ 0.7
ZC3H6P61129 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
ZC3H6P61129 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ZC3H6P61129 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ZC3H6P61129 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ZC3H6P61129 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ZC3H6P61129 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
ZC3H6P61129 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ZC3H6P61129 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ZC3H6P61129 PIGF-202ENST00000306465 1061 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ZC3H6P61129 SPATA8-201ENST00000328504 1083 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
ZC3H6P61129 COX20P1-201ENST00000366529 357 ntBASIC19.41■□□□□ 0.7
ZC3H6P61129 FAM92A-202ENST00000423990 914 ntTSL 5 BASIC19.41■□□□□ 0.7
ZC3H6P61129 AC093826.1-201ENST00000508655 993 ntBASIC19.41■□□□□ 0.7
ZC3H6P61129 PIGT-208ENST00000545755 1158 ntTSL 5 BASIC19.41■□□□□ 0.7
ZC3H6P61129 SHBG-210ENST00000572262 984 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ZC3H6P61129 AC020934.2-201ENST00000592400 456 ntTSL 3 BASIC19.41■□□□□ 0.7
ZC3H6P61129 AL591471.1-201ENST00000621855 229 ntBASIC19.41■□□□□ 0.7
ZC3H6P61129 AC148477.9-201ENST00000623974 539 ntBASIC19.41■□□□□ 0.7
ZC3H6P61129 KHSRPP1-201ENST00000427983 1768 ntBASIC19.41■□□□□ 0.7
ZC3H6P61129 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
ZC3H6P61129 GNAO1-205ENST00000563661 1351 ntTSL 2 BASIC19.41■□□□□ 0.7
ZC3H6P61129 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ZC3H6P61129 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
ZC3H6P61129 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC19.41■□□□□ 0.7
ZC3H6P61129 ALG11-203ENST00000523764 1404 ntTSL 2 BASIC19.41■□□□□ 0.7
ZC3H6P61129 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC19.41■□□□□ 0.7
ZC3H6P61129 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
ZC3H6P61129 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
ZC3H6P61129 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ZC3H6P61129 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ZC3H6P61129 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC19.41■□□□□ 0.7
ZC3H6P61129 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ZC3H6P61129 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ZC3H6P61129 AGGF1P1-201ENST00000509500 2073 ntBASIC19.4■□□□□ 0.7
ZC3H6P61129 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ZC3H6P61129 KIR2DS4-201ENST00000339924 1608 ntAPPRIS P5 TSL 1 (best) BASIC19.4■□□□□ 0.7
ZC3H6P61129 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
ZC3H6P61129 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
ZC3H6P61129 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
ZC3H6P61129 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ZC3H6P61129 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
ZC3H6P61129 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
ZC3H6P61129 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ZC3H6P61129 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ZC3H6P61129 SF1-209ENST00000433274 2317 ntTSL 2 BASIC19.4■□□□□ 0.7
ZC3H6P61129 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
ZC3H6P61129 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
ZC3H6P61129 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ZC3H6P61129 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ZC3H6P61129 TMSB15A-201ENST00000289373 685 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ZC3H6P61129 CHTF8-202ENST00000398235 1073 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
ZC3H6P61129 AC112721.1-201ENST00000409162 588 ntTSL 3 BASIC19.4■□□□□ 0.7
ZC3H6P61129 AC245884.1-201ENST00000457113 529 ntTSL 3 BASIC19.4■□□□□ 0.7
ZC3H6P61129 DMKN-229ENST00000467637 827 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
ZC3H6P61129 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC19.4■□□□□ 0.7
ZC3H6P61129 AP003068.3-201ENST00000527789 175 ntTSL 2 BASIC19.4■□□□□ 0.7
ZC3H6P61129 TREHP1-201ENST00000531328 465 ntBASIC19.4■□□□□ 0.7
ZC3H6P61129 AC068025.1-201ENST00000577218 762 ntTSL 3 BASIC19.4■□□□□ 0.7
ZC3H6P61129 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC19.4■□□□□ 0.7
ZC3H6P61129 AP001029.1-201ENST00000589843 168 ntTSL 3 BASIC19.4■□□□□ 0.7
ZC3H6P61129 AC003006.1-202ENST00000594684 612 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ZC3H6P61129 HMGB1P24-201ENST00000611897 328 ntBASIC19.4■□□□□ 0.7
ZC3H6P61129 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC19.4■□□□□ 0.7
ZC3H6P61129 TTC23L-209ENST00000638320 1185 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms