Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC14.52□□□□□ -0.09
CDH13P55290 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC14.52□□□□□ -0.09
CDH13P55290 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
CDH13P55290 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC14.52□□□□□ -0.09
CDH13P55290 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CDH13P55290 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CDH13P55290 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CDH13P55290 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.09
CDH13P55290 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC14.52□□□□□ -0.09
CDH13P55290 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CDH13P55290 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CDH13P55290 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CDH13P55290 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDH13P55290 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDH13P55290 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDH13P55290 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CDH13P55290 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CDH13P55290 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC14.51□□□□□ -0.09
CDH13P55290 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDH13P55290 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
CDH13P55290 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDH13P55290 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDH13P55290 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDH13P55290 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
CDH13P55290 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDH13P55290 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDH13P55290 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC14.51□□□□□ -0.09
CDH13P55290 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDH13P55290 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDH13P55290 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CDH13P55290 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC14.51□□□□□ -0.09
CDH13P55290 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDH13P55290 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CDH13P55290 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC14.51□□□□□ -0.09
CDH13P55290 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CDH13P55290 ACTBP8-201ENST00000403258 1108 ntBASIC14.51□□□□□ -0.09
CDH13P55290 ELK1P1-201ENST00000485699 580 ntBASIC14.51□□□□□ -0.09
CDH13P55290 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC14.51□□□□□ -0.09
CDH13P55290 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC14.51□□□□□ -0.09
CDH13P55290 INO80C-206ENST00000586489 594 ntTSL 3 BASIC14.51□□□□□ -0.09
CDH13P55290 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC14.51□□□□□ -0.09
CDH13P55290 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC14.51□□□□□ -0.09
CDH13P55290 AC092364.2-202ENST00000597012 1073 ntBASIC14.51□□□□□ -0.09
CDH13P55290 AC004233.3-201ENST00000607794 1269 ntBASIC14.51□□□□□ -0.09
CDH13P55290 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDH13P55290 GPALPP1-207ENST00000611650 899 ntBASIC14.51□□□□□ -0.09
CDH13P55290 METTL26-214ENST00000614890 801 ntTSL 3 BASIC14.51□□□□□ -0.09
CDH13P55290 AL603764.1-201ENST00000636452 321 ntBASIC14.51□□□□□ -0.09
CDH13P55290 RN7SL832P-201ENST00000607781 1756 ntBASIC14.51□□□□□ -0.09
CDH13P55290 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC14.51□□□□□ -0.09
CDH13P55290 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDH13P55290 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDH13P55290 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CDH13P55290 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
CDH13P55290 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CDH13P55290 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CDH13P55290 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDH13P55290 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CDH13P55290 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC14.51□□□□□ -0.09
CDH13P55290 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
CDH13P55290 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDH13P55290 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC14.5□□□□□ -0.09
CDH13P55290 INE2-201ENST00000630399 1874 ntBASIC14.5□□□□□ -0.09
CDH13P55290 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
CDH13P55290 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
CDH13P55290 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDH13P55290 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDH13P55290 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDH13P55290 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDH13P55290 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC14.5□□□□□ -0.09
CDH13P55290 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CDH13P55290 AL391825.1-201ENST00000457671 1364 ntBASIC14.5□□□□□ -0.09
CDH13P55290 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CDH13P55290 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CDH13P55290 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CDH13P55290 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDH13P55290 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
CDH13P55290 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDH13P55290 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDH13P55290 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CDH13P55290 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDH13P55290 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDH13P55290 TLE1P1-201ENST00000422965 589 ntBASIC14.5□□□□□ -0.09
CDH13P55290 TSPY16P-201ENST00000449843 468 ntBASIC14.5□□□□□ -0.09
CDH13P55290 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC14.5□□□□□ -0.09
CDH13P55290 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC14.5□□□□□ -0.09
CDH13P55290 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC14.5□□□□□ -0.09
CDH13P55290 KSR1-207ENST00000578981 748 ntTSL 4 BASIC14.5□□□□□ -0.09
CDH13P55290 CTBP2P3-201ENST00000585629 1255 ntBASIC14.5□□□□□ -0.09
CDH13P55290 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDH13P55290 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
CDH13P55290 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDH13P55290 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CDH13P55290 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDH13P55290 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDH13P55290 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDH13P55290 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CDH13P55290 AC089987.1-201ENST00000551654 2209 ntBASIC14.5□□□□□ -0.09
CDH13P55290 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDH13P55290 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms