Protein–RNA interactions for Protein: P55160

NCKAP1L, Nck-associated protein 1-like, humanhuman

Predictions only

Length 1,127 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1LP55160 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC16.11■□□□□ 0.17
NCKAP1LP55160 FAS-202ENST00000352159 1722 ntTSL 5 BASIC16.11■□□□□ 0.17
NCKAP1LP55160 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NCKAP1LP55160 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
NCKAP1LP55160 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
NCKAP1LP55160 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NCKAP1LP55160 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
NCKAP1LP55160 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
NCKAP1LP55160 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
NCKAP1LP55160 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NCKAP1LP55160 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
NCKAP1LP55160 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC16.11■□□□□ 0.17
NCKAP1LP55160 PTPA-218ENST00000435132 618 ntTSL 2 BASIC16.11■□□□□ 0.17
NCKAP1LP55160 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC16.11■□□□□ 0.17
NCKAP1LP55160 RNMTL1P1-201ENST00000454103 560 ntBASIC16.11■□□□□ 0.17
NCKAP1LP55160 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC16.11■□□□□ 0.17
NCKAP1LP55160 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC16.11■□□□□ 0.17
NCKAP1LP55160 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
NCKAP1LP55160 AC005962.1-201ENST00000584100 773 ntBASIC16.11■□□□□ 0.17
NCKAP1LP55160 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC16.11■□□□□ 0.17
NCKAP1LP55160 AC009884.2-201ENST00000603110 324 ntBASIC16.11■□□□□ 0.17
NCKAP1LP55160 AC007191.1-201ENST00000623179 2995 ntBASIC16.11■□□□□ 0.17
NCKAP1LP55160 PCBP2-OT1-201ENST00000634357 590 ntBASIC16.11■□□□□ 0.17
NCKAP1LP55160 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
NCKAP1LP55160 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
NCKAP1LP55160 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NCKAP1LP55160 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NCKAP1LP55160 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC16.11■□□□□ 0.17
NCKAP1LP55160 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC16.11■□□□□ 0.17
NCKAP1LP55160 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
NCKAP1LP55160 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
NCKAP1LP55160 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NCKAP1LP55160 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
NCKAP1LP55160 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NCKAP1LP55160 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NCKAP1LP55160 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NCKAP1LP55160 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
NCKAP1LP55160 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NCKAP1LP55160 HARS-202ENST00000415192 1401 ntTSL 2 BASIC16.11■□□□□ 0.17
NCKAP1LP55160 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC16.1■□□□□ 0.17
NCKAP1LP55160 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
NCKAP1LP55160 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NCKAP1LP55160 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
NCKAP1LP55160 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
NCKAP1LP55160 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
NCKAP1LP55160 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC16.1■□□□□ 0.17
NCKAP1LP55160 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
NCKAP1LP55160 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC16.1■□□□□ 0.17
NCKAP1LP55160 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
NCKAP1LP55160 NORAD-201ENST00000565493 5339 ntBASIC16.1■□□□□ 0.17
NCKAP1LP55160 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
NCKAP1LP55160 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
NCKAP1LP55160 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC16.1■□□□□ 0.17
NCKAP1LP55160 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
NCKAP1LP55160 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NCKAP1LP55160 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
NCKAP1LP55160 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
NCKAP1LP55160 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC16.1■□□□□ 0.17
NCKAP1LP55160 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
NCKAP1LP55160 GAS5-209ENST00000430245 723 ntTSL 3 BASIC16.1■□□□□ 0.17
NCKAP1LP55160 AC104306.2-201ENST00000451877 341 ntBASIC16.1■□□□□ 0.17
NCKAP1LP55160 AC021723.1-201ENST00000486306 515 ntBASIC16.1■□□□□ 0.17
NCKAP1LP55160 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC16.1■□□□□ 0.17
NCKAP1LP55160 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
NCKAP1LP55160 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC16.1■□□□□ 0.17
NCKAP1LP55160 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
NCKAP1LP55160 AL160314.3-201ENST00000556041 767 ntBASIC16.1■□□□□ 0.17
NCKAP1LP55160 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC16.1■□□□□ 0.17
NCKAP1LP55160 MIR4538-201ENST00000581377 78 ntBASIC16.1■□□□□ 0.17
NCKAP1LP55160 RN7SL219P-201ENST00000582872 296 ntBASIC16.1■□□□□ 0.17
NCKAP1LP55160 AP000346.4-201ENST00000614827 381 ntBASIC16.1■□□□□ 0.17
NCKAP1LP55160 MIR6869-201ENST00000619434 62 ntBASIC16.1■□□□□ 0.17
NCKAP1LP55160 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC16.1■□□□□ 0.17
NCKAP1LP55160 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NCKAP1LP55160 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
NCKAP1LP55160 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
NCKAP1LP55160 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC16.1■□□□□ 0.17
NCKAP1LP55160 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC16.1■□□□□ 0.17
NCKAP1LP55160 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NCKAP1LP55160 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
NCKAP1LP55160 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC16.1■□□□□ 0.17
NCKAP1LP55160 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC16.1■□□□□ 0.17
NCKAP1LP55160 RN7SL832P-201ENST00000607781 1756 ntBASIC16.1■□□□□ 0.17
NCKAP1LP55160 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC16.1■□□□□ 0.17
NCKAP1LP55160 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
NCKAP1LP55160 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NCKAP1LP55160 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC16.1■□□□□ 0.17
NCKAP1LP55160 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
NCKAP1LP55160 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
NCKAP1LP55160 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
NCKAP1LP55160 GSN-209ENST00000449733 2702 ntTSL 2 BASIC16.1■□□□□ 0.17
NCKAP1LP55160 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC16.1■□□□□ 0.17
NCKAP1LP55160 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC16.09■□□□□ 0.17
NCKAP1LP55160 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC16.09■□□□□ 0.17
NCKAP1LP55160 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
NCKAP1LP55160 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NCKAP1LP55160 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NCKAP1LP55160 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
NCKAP1LP55160 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC16.09■□□□□ 0.17
NCKAP1LP55160 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms