Protein–RNA interactions for Protein: P54764

EPHA4, Ephrin type-A receptor 4, humanhuman

Predictions only

Length 986 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4P54764 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC14.22□□□□□ -0.13
EPHA4P54764 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
EPHA4P54764 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
EPHA4P54764 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC14.22□□□□□ -0.13
EPHA4P54764 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
EPHA4P54764 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
EPHA4P54764 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC14.22□□□□□ -0.13
EPHA4P54764 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
EPHA4P54764 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC14.22□□□□□ -0.13
EPHA4P54764 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
EPHA4P54764 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
EPHA4P54764 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
EPHA4P54764 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
EPHA4P54764 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
EPHA4P54764 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
EPHA4P54764 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
EPHA4P54764 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
EPHA4P54764 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
EPHA4P54764 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC14.22□□□□□ -0.13
EPHA4P54764 MSRA-203ENST00000441698 788 ntTSL 2 BASIC14.22□□□□□ -0.13
EPHA4P54764 AC006335.1-201ENST00000445200 547 ntBASIC14.22□□□□□ -0.13
EPHA4P54764 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
EPHA4P54764 AC245884.6-201ENST00000515672 1067 ntBASIC14.22□□□□□ -0.13
EPHA4P54764 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC14.22□□□□□ -0.13
EPHA4P54764 AC024681.1-201ENST00000521917 487 ntBASIC14.22□□□□□ -0.13
EPHA4P54764 RHOQP1-201ENST00000555758 579 ntBASIC14.22□□□□□ -0.13
EPHA4P54764 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC14.22□□□□□ -0.13
EPHA4P54764 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC14.22□□□□□ -0.13
EPHA4P54764 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC14.22□□□□□ -0.13
EPHA4P54764 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
EPHA4P54764 AC084346.2-201ENST00000607097 949 ntBASIC14.22□□□□□ -0.13
EPHA4P54764 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC14.22□□□□□ -0.13
EPHA4P54764 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC14.22□□□□□ -0.13
EPHA4P54764 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
EPHA4P54764 API5-203ENST00000455725 2257 ntTSL 2 BASIC14.22□□□□□ -0.13
EPHA4P54764 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
EPHA4P54764 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
EPHA4P54764 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
EPHA4P54764 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
EPHA4P54764 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
EPHA4P54764 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
EPHA4P54764 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
EPHA4P54764 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
EPHA4P54764 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
EPHA4P54764 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
EPHA4P54764 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
EPHA4P54764 AC006486.2-201ENST00000624246 2199 ntBASIC14.22□□□□□ -0.13
EPHA4P54764 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
EPHA4P54764 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
EPHA4P54764 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
EPHA4P54764 AL590440.2-201ENST00000641973 1595 ntBASIC14.22□□□□□ -0.13
EPHA4P54764 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
EPHA4P54764 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
EPHA4P54764 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
EPHA4P54764 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
EPHA4P54764 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
EPHA4P54764 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC14.21□□□□□ -0.13
EPHA4P54764 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
EPHA4P54764 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
EPHA4P54764 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.13
EPHA4P54764 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
EPHA4P54764 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC14.21□□□□□ -0.13
EPHA4P54764 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
EPHA4P54764 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
EPHA4P54764 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
EPHA4P54764 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
EPHA4P54764 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
EPHA4P54764 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC14.21□□□□□ -0.13
EPHA4P54764 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC14.21□□□□□ -0.13
EPHA4P54764 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
EPHA4P54764 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
EPHA4P54764 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC14.21□□□□□ -0.13
EPHA4P54764 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
EPHA4P54764 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
EPHA4P54764 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC14.21□□□□□ -0.13
EPHA4P54764 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC14.21□□□□□ -0.13
EPHA4P54764 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC14.21□□□□□ -0.13
EPHA4P54764 AC006122.1-201ENST00000493323 440 ntBASIC14.21□□□□□ -0.13
EPHA4P54764 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC14.21□□□□□ -0.13
EPHA4P54764 SCARNA21-201ENST00000517026 139 ntBASIC14.21□□□□□ -0.13
EPHA4P54764 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC14.21□□□□□ -0.13
EPHA4P54764 RBM8B-201ENST00000555532 525 ntBASIC14.21□□□□□ -0.13
EPHA4P54764 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC14.21□□□□□ -0.13
EPHA4P54764 PAM16-211ENST00000575848 518 ntTSL 3 BASIC14.21□□□□□ -0.13
EPHA4P54764 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
EPHA4P54764 AC060766.1-201ENST00000590824 627 ntBASIC14.21□□□□□ -0.13
EPHA4P54764 AC133540.1-201ENST00000620845 1019 ntBASIC14.21□□□□□ -0.13
EPHA4P54764 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
EPHA4P54764 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
EPHA4P54764 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
EPHA4P54764 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
EPHA4P54764 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
EPHA4P54764 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
EPHA4P54764 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
EPHA4P54764 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC14.21□□□□□ -0.13
EPHA4P54764 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
EPHA4P54764 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
EPHA4P54764 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
EPHA4P54764 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
EPHA4P54764 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 61.9 ms