Protein–RNA interactions for Protein: P54760

EPHB4, Ephrin type-B receptor 4, humanhuman

Predictions only

Length 987 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4P54760 MIR4313-201ENST00000580760 101 ntBASIC16.67■□□□□ 0.26
EPHB4P54760 AC012044.1-201ENST00000603431 297 ntBASIC16.67■□□□□ 0.26
EPHB4P54760 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
EPHB4P54760 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
EPHB4P54760 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
EPHB4P54760 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC16.67■□□□□ 0.26
EPHB4P54760 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
EPHB4P54760 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
EPHB4P54760 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
EPHB4P54760 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
EPHB4P54760 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
EPHB4P54760 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
EPHB4P54760 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC16.67■□□□□ 0.26
EPHB4P54760 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
EPHB4P54760 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
EPHB4P54760 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
EPHB4P54760 BANP-203ENST00000393207 2438 ntTSL 2 BASIC16.67■□□□□ 0.26
EPHB4P54760 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
EPHB4P54760 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
EPHB4P54760 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
EPHB4P54760 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
EPHB4P54760 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
EPHB4P54760 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
EPHB4P54760 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
EPHB4P54760 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
EPHB4P54760 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
EPHB4P54760 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
EPHB4P54760 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
EPHB4P54760 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
EPHB4P54760 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
EPHB4P54760 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
EPHB4P54760 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
EPHB4P54760 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
EPHB4P54760 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
EPHB4P54760 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
EPHB4P54760 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
EPHB4P54760 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
EPHB4P54760 PDIA3P2-201ENST00000428073 158 ntBASIC16.66■□□□□ 0.26
EPHB4P54760 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
EPHB4P54760 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
EPHB4P54760 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
EPHB4P54760 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC16.66■□□□□ 0.26
EPHB4P54760 AC106794.1-201ENST00000506935 792 ntBASIC16.66■□□□□ 0.26
EPHB4P54760 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC16.66■□□□□ 0.26
EPHB4P54760 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC16.66■□□□□ 0.26
EPHB4P54760 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC16.66■□□□□ 0.26
EPHB4P54760 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC16.66■□□□□ 0.26
EPHB4P54760 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC16.66■□□□□ 0.26
EPHB4P54760 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC16.66■□□□□ 0.26
EPHB4P54760 PGAM1P5-201ENST00000548011 764 ntBASIC16.66■□□□□ 0.26
EPHB4P54760 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC16.66■□□□□ 0.26
EPHB4P54760 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC16.66■□□□□ 0.26
EPHB4P54760 AC106820.3-201ENST00000561653 397 ntBASIC16.66■□□□□ 0.26
EPHB4P54760 AC061992.1-201ENST00000592569 777 ntTSL 3 BASIC16.66■□□□□ 0.26
EPHB4P54760 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC16.66■□□□□ 0.26
EPHB4P54760 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC16.66■□□□□ 0.26
EPHB4P54760 AC103691.2-201ENST00000618824 433 ntBASIC16.66■□□□□ 0.26
EPHB4P54760 COX6A1P2-201ENST00000620597 330 ntBASIC16.66■□□□□ 0.26
EPHB4P54760 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC16.66■□□□□ 0.26
EPHB4P54760 ZEB1-AS1-208ENST00000607166 2503 ntBASIC16.66■□□□□ 0.26
EPHB4P54760 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC16.66■□□□□ 0.26
EPHB4P54760 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC16.66■□□□□ 0.26
EPHB4P54760 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
EPHB4P54760 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
EPHB4P54760 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
EPHB4P54760 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC16.65■□□□□ 0.26
EPHB4P54760 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
EPHB4P54760 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
EPHB4P54760 AC004899.1-201ENST00000424687 1714 ntBASIC16.65■□□□□ 0.26
EPHB4P54760 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
EPHB4P54760 AC009090.5-201ENST00000624886 2285 ntBASIC16.65■□□□□ 0.26
EPHB4P54760 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
EPHB4P54760 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
EPHB4P54760 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
EPHB4P54760 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
EPHB4P54760 RPSAP31-201ENST00000416648 895 ntBASIC16.65■□□□□ 0.26
EPHB4P54760 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC16.65■□□□□ 0.26
EPHB4P54760 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC16.65■□□□□ 0.26
EPHB4P54760 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
EPHB4P54760 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC16.65■□□□□ 0.26
EPHB4P54760 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC16.65■□□□□ 0.26
EPHB4P54760 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC16.65■□□□□ 0.26
EPHB4P54760 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
EPHB4P54760 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC16.65■□□□□ 0.26
EPHB4P54760 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC16.65■□□□□ 0.26
EPHB4P54760 RTN3P1-201ENST00000536295 711 ntBASIC16.65■□□□□ 0.26
EPHB4P54760 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
EPHB4P54760 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC16.65■□□□□ 0.26
EPHB4P54760 MIR4783-201ENST00000580343 82 ntBASIC16.65■□□□□ 0.26
EPHB4P54760 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
EPHB4P54760 AC087045.2-201ENST00000606279 1003 ntBASIC16.65■□□□□ 0.26
EPHB4P54760 AC006453.1-201ENST00000636037 1257 ntBASIC16.65■□□□□ 0.26
EPHB4P54760 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
EPHB4P54760 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
EPHB4P54760 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
EPHB4P54760 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
EPHB4P54760 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
EPHB4P54760 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
EPHB4P54760 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
EPHB4P54760 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms