Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
LIMK2P53671 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
LIMK2P53671 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LIMK2P53671 RPS15-201ENST00000233609 534 ntTSL 2 BASIC14.94□□□□□ -0.02
LIMK2P53671 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC14.94□□□□□ -0.02
LIMK2P53671 ZBTB12BP-201ENST00000314232 1122 ntBASIC14.94□□□□□ -0.02
LIMK2P53671 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
LIMK2P53671 FAM21FP-201ENST00000426241 1131 ntBASIC14.94□□□□□ -0.02
LIMK2P53671 ACTBP11-201ENST00000436287 1126 ntBASIC14.94□□□□□ -0.02
LIMK2P53671 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC14.94□□□□□ -0.02
LIMK2P53671 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC14.94□□□□□ -0.02
LIMK2P53671 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
LIMK2P53671 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
LIMK2P53671 AC079316.1-201ENST00000548397 411 ntBASIC14.94□□□□□ -0.02
LIMK2P53671 RPS15-205ENST00000586686 562 ntTSL 5 BASIC14.94□□□□□ -0.02
LIMK2P53671 RPS15-208ENST00000591804 711 ntTSL 5 BASIC14.94□□□□□ -0.02
LIMK2P53671 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
LIMK2P53671 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
LIMK2P53671 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LIMK2P53671 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LIMK2P53671 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
LIMK2P53671 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
LIMK2P53671 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
LIMK2P53671 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
LIMK2P53671 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC14.94□□□□□ -0.02
LIMK2P53671 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
LIMK2P53671 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
LIMK2P53671 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
LIMK2P53671 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LIMK2P53671 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
LIMK2P53671 TUBB1P2-201ENST00000422712 1306 ntBASIC14.93□□□□□ -0.02
LIMK2P53671 TUBB1P1-201ENST00000503144 1300 ntBASIC14.93□□□□□ -0.02
LIMK2P53671 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
LIMK2P53671 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
LIMK2P53671 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
LIMK2P53671 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
LIMK2P53671 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
LIMK2P53671 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LIMK2P53671 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
LIMK2P53671 AC011474.4-201ENST00000623523 2076 ntBASIC14.93□□□□□ -0.02
LIMK2P53671 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
LIMK2P53671 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
LIMK2P53671 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
LIMK2P53671 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
LIMK2P53671 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC14.93□□□□□ -0.02
LIMK2P53671 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
LIMK2P53671 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LIMK2P53671 APOC3-202ENST00000375345 604 ntTSL 5 BASIC14.93□□□□□ -0.02
LIMK2P53671 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LIMK2P53671 MPV17-206ENST00000402722 827 ntTSL 3 BASIC14.93□□□□□ -0.02
LIMK2P53671 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
LIMK2P53671 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC14.93□□□□□ -0.02
LIMK2P53671 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
LIMK2P53671 AL355994.2-201ENST00000447882 704 ntBASIC14.93□□□□□ -0.02
LIMK2P53671 AC114812.1-204ENST00000449669 728 ntBASIC14.93□□□□□ -0.02
LIMK2P53671 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
LIMK2P53671 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
LIMK2P53671 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC14.93□□□□□ -0.02
LIMK2P53671 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
LIMK2P53671 PACS1-203ENST00000524815 628 ntTSL 4 BASIC14.93□□□□□ -0.02
LIMK2P53671 AP001582.1-201ENST00000525856 295 ntBASIC14.93□□□□□ -0.02
LIMK2P53671 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC14.93□□□□□ -0.02
LIMK2P53671 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC14.93□□□□□ -0.02
LIMK2P53671 KSR1-207ENST00000578981 748 ntTSL 4 BASIC14.93□□□□□ -0.02
LIMK2P53671 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
LIMK2P53671 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LIMK2P53671 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LIMK2P53671 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LIMK2P53671 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC14.93□□□□□ -0.02
LIMK2P53671 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LIMK2P53671 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LIMK2P53671 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
LIMK2P53671 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC14.93□□□□□ -0.02
LIMK2P53671 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC14.93□□□□□ -0.02
LIMK2P53671 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
LIMK2P53671 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC14.93□□□□□ -0.02
LIMK2P53671 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC14.93□□□□□ -0.02
LIMK2P53671 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
LIMK2P53671 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LIMK2P53671 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
LIMK2P53671 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
LIMK2P53671 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LIMK2P53671 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
LIMK2P53671 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LIMK2P53671 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
LIMK2P53671 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
LIMK2P53671 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LIMK2P53671 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
LIMK2P53671 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
LIMK2P53671 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LIMK2P53671 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC14.92□□□□□ -0.02
LIMK2P53671 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
LIMK2P53671 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC14.92□□□□□ -0.02
LIMK2P53671 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC14.92□□□□□ -0.02
LIMK2P53671 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC14.92□□□□□ -0.02
LIMK2P53671 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
LIMK2P53671 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
LIMK2P53671 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LIMK2P53671 AL359881.3-201ENST00000602640 1721 ntBASIC14.92□□□□□ -0.02
LIMK2P53671 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC14.92□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms