Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC17.36■□□□□ 0.37
MRE11P49959 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC17.36■□□□□ 0.37
MRE11P49959 FAM86C2P-203ENST00000528684 1004 ntBASIC17.36■□□□□ 0.37
MRE11P49959 KRT17P8-201ENST00000540749 863 ntBASIC17.36■□□□□ 0.37
MRE11P49959 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC17.36■□□□□ 0.37
MRE11P49959 TP53TG3HP-202ENST00000569755 579 ntBASIC17.36■□□□□ 0.37
MRE11P49959 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
MRE11P49959 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
MRE11P49959 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC17.36■□□□□ 0.37
MRE11P49959 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC17.36■□□□□ 0.37
MRE11P49959 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
MRE11P49959 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
MRE11P49959 AAR2-202ENST00000373932 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
MRE11P49959 TJAP1-208ENST00000438588 2716 ntTSL 5 BASIC17.36■□□□□ 0.37
MRE11P49959 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC17.36■□□□□ 0.37
MRE11P49959 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC17.36■□□□□ 0.37
MRE11P49959 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC17.36■□□□□ 0.37
MRE11P49959 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC17.36■□□□□ 0.37
MRE11P49959 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
MRE11P49959 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
MRE11P49959 TMEM25-204ENST00000359862 2395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
MRE11P49959 MEST-204ENST00000393187 2380 ntAPPRIS ALT1 TSL 5 BASIC17.36■□□□□ 0.37
MRE11P49959 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
MRE11P49959 OS9-201ENST00000257966 2505 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
MRE11P49959 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
MRE11P49959 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC17.35■□□□□ 0.37
MRE11P49959 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
MRE11P49959 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
MRE11P49959 STAT4-202ENST00000392320 2822 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
MRE11P49959 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
MRE11P49959 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC17.35■□□□□ 0.37
MRE11P49959 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
MRE11P49959 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
MRE11P49959 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
MRE11P49959 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
MRE11P49959 DMBT1P1-203ENST00000636837 4628 ntBASIC17.35■□□□□ 0.37
MRE11P49959 CD99L2-205ENST00000437787 3493 ntTSL 2 BASIC17.35■□□□□ 0.37
MRE11P49959 AC098614.1-201ENST00000368528 745 ntBASIC17.35■□□□□ 0.37
MRE11P49959 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC17.35■□□□□ 0.37
MRE11P49959 AC136604.1-201ENST00000418535 575 ntBASIC17.35■□□□□ 0.37
MRE11P49959 GPS2P2-201ENST00000430745 888 ntBASIC17.35■□□□□ 0.37
MRE11P49959 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC17.35■□□□□ 0.37
MRE11P49959 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
MRE11P49959 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
MRE11P49959 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC17.35■□□□□ 0.37
MRE11P49959 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC17.35■□□□□ 0.37
MRE11P49959 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC17.35■□□□□ 0.37
MRE11P49959 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
MRE11P49959 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
MRE11P49959 CDK4-206ENST00000549606 558 ntTSL 2 BASIC17.35■□□□□ 0.37
MRE11P49959 MIR4538-201ENST00000581377 78 ntBASIC17.35■□□□□ 0.37
MRE11P49959 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
MRE11P49959 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC17.35■□□□□ 0.37
MRE11P49959 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC17.35■□□□□ 0.37
MRE11P49959 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
MRE11P49959 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC17.35■□□□□ 0.37
MRE11P49959 SF1-205ENST00000377394 2854 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
MRE11P49959 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
MRE11P49959 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC17.35■□□□□ 0.37
MRE11P49959 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC17.35■□□□□ 0.37
MRE11P49959 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
MRE11P49959 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC17.35■□□□□ 0.37
MRE11P49959 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
MRE11P49959 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
MRE11P49959 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
MRE11P49959 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
MRE11P49959 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
MRE11P49959 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
MRE11P49959 OTP-201ENST00000306422 3669 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
MRE11P49959 GUSBP11-206ENST00000455485 3816 ntTSL 2 BASIC17.35■□□□□ 0.37
MRE11P49959 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
MRE11P49959 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
MRE11P49959 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC17.35■□□□□ 0.37
MRE11P49959 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
MRE11P49959 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
MRE11P49959 PROKR1-201ENST00000303786 4273 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
MRE11P49959 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
MRE11P49959 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
MRE11P49959 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
MRE11P49959 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
MRE11P49959 AC012617.1-204ENST00000586340 2305 ntBASIC17.35■□□□□ 0.37
MRE11P49959 Z99774.1-201ENST00000382641 2613 ntTSL 2 BASIC17.34■□□□□ 0.37
MRE11P49959 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
MRE11P49959 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
MRE11P49959 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
MRE11P49959 FUK-202ENST00000378912 3925 ntTSL 2 BASIC17.34■□□□□ 0.37
MRE11P49959 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
MRE11P49959 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
MRE11P49959 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
MRE11P49959 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
MRE11P49959 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
MRE11P49959 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
MRE11P49959 SYNE3-201ENST00000334258 3275 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
MRE11P49959 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
MRE11P49959 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
MRE11P49959 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
MRE11P49959 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
MRE11P49959 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
MRE11P49959 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
MRE11P49959 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms