Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
TM4SF4P48230 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC16.39■□□□□ 0.21
TM4SF4P48230 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
TM4SF4P48230 AC112693.3-201ENST00000624819 1983 ntBASIC16.39■□□□□ 0.21
TM4SF4P48230 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TM4SF4P48230 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC16.39■□□□□ 0.21
TM4SF4P48230 AC022080.1-201ENST00000366255 781 ntBASIC16.39■□□□□ 0.21
TM4SF4P48230 TNNT2-207ENST00000367322 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
TM4SF4P48230 SNORA57-201ENST00000383870 149 ntBASIC16.39■□□□□ 0.21
TM4SF4P48230 Z95624.1-201ENST00000413528 628 ntTSL 5 BASIC16.39■□□□□ 0.21
TM4SF4P48230 AC073210.1-201ENST00000414799 232 ntBASIC16.39■□□□□ 0.21
TM4SF4P48230 AL137244.1-201ENST00000422931 865 ntBASIC16.39■□□□□ 0.21
TM4SF4P48230 AC074389.3-201ENST00000450458 454 ntTSL 3 BASIC16.39■□□□□ 0.21
TM4SF4P48230 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC16.39■□□□□ 0.21
TM4SF4P48230 BAK1P2-201ENST00000532665 631 ntBASIC16.39■□□□□ 0.21
TM4SF4P48230 GABARAPL1-213ENST00000544284 531 ntTSL 3 BASIC16.39■□□□□ 0.21
TM4SF4P48230 AC078814.4-201ENST00000546650 327 ntBASIC16.39■□□□□ 0.21
TM4SF4P48230 AC120498.7-201ENST00000562876 330 ntBASIC16.39■□□□□ 0.21
TM4SF4P48230 AC005586.2-201ENST00000563946 837 ntBASIC16.39■□□□□ 0.21
TM4SF4P48230 TUBB6-214ENST00000592683 481 ntTSL 4 BASIC16.39■□□□□ 0.21
TM4SF4P48230 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC16.39■□□□□ 0.21
TM4SF4P48230 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC16.39■□□□□ 0.21
TM4SF4P48230 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TM4SF4P48230 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TM4SF4P48230 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TM4SF4P48230 AC138932.1-201ENST00000534164 6830 ntBASIC16.39■□□□□ 0.21
TM4SF4P48230 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
TM4SF4P48230 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC16.39■□□□□ 0.21
TM4SF4P48230 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TM4SF4P48230 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TM4SF4P48230 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
TM4SF4P48230 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TM4SF4P48230 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TM4SF4P48230 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TM4SF4P48230 SUCLA2-205ENST00000470760 1445 ntTSL 2 BASIC16.38■□□□□ 0.21
TM4SF4P48230 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC16.38■□□□□ 0.21
TM4SF4P48230 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC16.38■□□□□ 0.21
TM4SF4P48230 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
TM4SF4P48230 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TM4SF4P48230 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TM4SF4P48230 PCBD1-201ENST00000299299 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TM4SF4P48230 SIRPB3P-201ENST00000340424 1216 ntBASIC16.38■□□□□ 0.21
TM4SF4P48230 HHLA3-202ENST00000361764 692 ntAPPRIS P3 TSL 2 BASIC16.38■□□□□ 0.21
TM4SF4P48230 AC010900.1-201ENST00000449849 1296 ntBASIC16.38■□□□□ 0.21
TM4SF4P48230 NALT1-202ENST00000450304 437 ntTSL 3 BASIC16.38■□□□□ 0.21
TM4SF4P48230 GSS-202ENST00000451957 1092 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TM4SF4P48230 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC16.38■□□□□ 0.21
TM4SF4P48230 C5orf63-203ENST00000509733 553 ntTSL 4 BASIC16.38■□□□□ 0.21
TM4SF4P48230 KHDRBS3-206ENST00000520981 1243 ntTSL 5 BASIC16.38■□□□□ 0.21
TM4SF4P48230 SPAG5-AS1-204ENST00000556050 871 ntTSL 2 BASIC16.38■□□□□ 0.21
TM4SF4P48230 AC074050.2-201ENST00000563338 538 ntTSL 3 BASIC16.38■□□□□ 0.21
TM4SF4P48230 CDIPT-AS1-202ENST00000565014 729 ntTSL 2 BASIC16.38■□□□□ 0.21
TM4SF4P48230 OVOL3-201ENST00000585332 695 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
TM4SF4P48230 AC006116.2-201ENST00000589958 988 ntBASIC16.38■□□□□ 0.21
TM4SF4P48230 GGNBP1-204ENST00000613113 887 ntBASIC16.38■□□□□ 0.21
TM4SF4P48230 PNPT1-207ENST00000625249 216 ntTSL 5 BASIC16.38■□□□□ 0.21
TM4SF4P48230 OVOL3-202ENST00000633214 675 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
TM4SF4P48230 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TM4SF4P48230 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
TM4SF4P48230 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TM4SF4P48230 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC16.38■□□□□ 0.21
TM4SF4P48230 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TM4SF4P48230 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TM4SF4P48230 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
TM4SF4P48230 PCDHGB8P-201ENST00000502926 1973 ntBASIC16.38■□□□□ 0.21
TM4SF4P48230 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC16.38■□□□□ 0.21
TM4SF4P48230 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
TM4SF4P48230 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC16.38■□□□□ 0.21
TM4SF4P48230 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TM4SF4P48230 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC16.38■□□□□ 0.21
TM4SF4P48230 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TM4SF4P48230 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
TM4SF4P48230 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TM4SF4P48230 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TM4SF4P48230 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TM4SF4P48230 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
TM4SF4P48230 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC16.37■□□□□ 0.21
TM4SF4P48230 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
TM4SF4P48230 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TM4SF4P48230 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC16.37■□□□□ 0.21
TM4SF4P48230 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TM4SF4P48230 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC16.37■□□□□ 0.21
TM4SF4P48230 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TM4SF4P48230 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TM4SF4P48230 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
TM4SF4P48230 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
TM4SF4P48230 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC16.37■□□□□ 0.21
TM4SF4P48230 C11orf53-201ENST00000280325 1208 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
TM4SF4P48230 CCL25-202ENST00000315626 450 ntTSL 2 BASIC16.37■□□□□ 0.21
TM4SF4P48230 KRTAP4-12-201ENST00000394014 1077 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
TM4SF4P48230 LINC00301-203ENST00000527161 749 ntTSL 2 BASIC16.37■□□□□ 0.21
TM4SF4P48230 BLOC1S5-205ENST00000543936 368 ntTSL 2 BASIC16.37■□□□□ 0.21
TM4SF4P48230 AC092073.1-202ENST00000606020 653 ntTSL 3 BASIC16.37■□□□□ 0.21
TM4SF4P48230 CSTP2-201ENST00000610599 398 ntBASIC16.37■□□□□ 0.21
TM4SF4P48230 CCL3L3-203ENST00000619989 784 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TM4SF4P48230 Metazoa_SRP.200-201ENST00000622073 282 ntBASIC16.37■□□□□ 0.21
TM4SF4P48230 AC020904.3-201ENST00000624199 442 ntBASIC16.37■□□□□ 0.21
TM4SF4P48230 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TM4SF4P48230 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
TM4SF4P48230 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms