Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
CEACAM3P40198 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CEACAM3P40198 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CEACAM3P40198 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
CEACAM3P40198 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CEACAM3P40198 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
CEACAM3P40198 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
CEACAM3P40198 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC12.13□□□□□ -0.47
CEACAM3P40198 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
CEACAM3P40198 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
CEACAM3P40198 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CEACAM3P40198 CLUHP2-201ENST00000426660 1303 ntBASIC12.13□□□□□ -0.47
CEACAM3P40198 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC12.13□□□□□ -0.47
CEACAM3P40198 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
CEACAM3P40198 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CEACAM3P40198 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC12.13□□□□□ -0.47
CEACAM3P40198 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
CEACAM3P40198 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CEACAM3P40198 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC12.13□□□□□ -0.47
CEACAM3P40198 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CEACAM3P40198 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC12.13□□□□□ -0.47
CEACAM3P40198 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CEACAM3P40198 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
CEACAM3P40198 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CEACAM3P40198 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC12.13□□□□□ -0.47
CEACAM3P40198 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC12.13□□□□□ -0.47
CEACAM3P40198 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
CEACAM3P40198 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
CEACAM3P40198 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CEACAM3P40198 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC12.13□□□□□ -0.47
CEACAM3P40198 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
CEACAM3P40198 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CEACAM3P40198 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
CEACAM3P40198 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
CEACAM3P40198 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
CEACAM3P40198 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CEACAM3P40198 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
CEACAM3P40198 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
CEACAM3P40198 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CEACAM3P40198 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
CEACAM3P40198 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
CEACAM3P40198 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CEACAM3P40198 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC12.13□□□□□ -0.47
CEACAM3P40198 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
CEACAM3P40198 AC006001.1-201ENST00000325130 474 ntBASIC12.13□□□□□ -0.47
CEACAM3P40198 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
CEACAM3P40198 SNX21-203ENST00000372541 771 ntTSL 2 BASIC12.13□□□□□ -0.47
CEACAM3P40198 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
CEACAM3P40198 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC12.13□□□□□ -0.47
CEACAM3P40198 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC12.13□□□□□ -0.47
CEACAM3P40198 AC112492.5-201ENST00000421897 457 ntBASIC12.13□□□□□ -0.47
CEACAM3P40198 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
CEACAM3P40198 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC12.13□□□□□ -0.47
CEACAM3P40198 ACA64.2-201ENST00000459014 129 ntBASIC12.13□□□□□ -0.47
CEACAM3P40198 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
CEACAM3P40198 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC12.13□□□□□ -0.47
CEACAM3P40198 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
CEACAM3P40198 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
CEACAM3P40198 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC12.13□□□□□ -0.47
CEACAM3P40198 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC12.13□□□□□ -0.47
CEACAM3P40198 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
CEACAM3P40198 AC244669.2-201ENST00000612320 853 ntBASIC12.13□□□□□ -0.47
CEACAM3P40198 RPS24-214ENST00000613865 538 ntTSL 5 BASIC12.13□□□□□ -0.47
CEACAM3P40198 MIR6805-201ENST00000615055 62 ntBASIC12.13□□□□□ -0.47
CEACAM3P40198 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CEACAM3P40198 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
CEACAM3P40198 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC12.13□□□□□ -0.47
CEACAM3P40198 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC12.13□□□□□ -0.47
CEACAM3P40198 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
CEACAM3P40198 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC12.13□□□□□ -0.47
CEACAM3P40198 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CEACAM3P40198 FANCC-201ENST00000289081 4585 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CEACAM3P40198 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
CEACAM3P40198 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CEACAM3P40198 AC003102.2-201ENST00000589195 1469 ntBASIC12.13□□□□□ -0.47
CEACAM3P40198 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CEACAM3P40198 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CEACAM3P40198 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC12.13□□□□□ -0.47
CEACAM3P40198 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC12.13□□□□□ -0.47
CEACAM3P40198 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CEACAM3P40198 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CEACAM3P40198 ELAVL1-201ENST00000407627 6015 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CEACAM3P40198 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CEACAM3P40198 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
CEACAM3P40198 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CEACAM3P40198 PRDM16-201ENST00000270722 8690 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
CEACAM3P40198 MYO16-203ENST00000357550 6779 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
CEACAM3P40198 AL138725.1-201ENST00000407347 1314 ntBASIC12.12□□□□□ -0.47
CEACAM3P40198 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CEACAM3P40198 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CEACAM3P40198 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
CEACAM3P40198 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
CEACAM3P40198 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CEACAM3P40198 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CEACAM3P40198 AP000593.2-201ENST00000542775 1433 ntBASIC12.12□□□□□ -0.47
CEACAM3P40198 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CEACAM3P40198 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
CEACAM3P40198 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
CEACAM3P40198 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
CEACAM3P40198 CR383656.2-201ENST00000548656 2254 ntBASIC12.12□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms