Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 HSPB1P2-201ENST00000448722 546 ntBASIC14.68□□□□□ -0.06
HMGCLP35914 RPL13AP20-201ENST00000459725 609 ntBASIC14.68□□□□□ -0.06
HMGCLP35914 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
HMGCLP35914 FAM86HP-204ENST00000513466 959 ntBASIC14.68□□□□□ -0.06
HMGCLP35914 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC14.68□□□□□ -0.06
HMGCLP35914 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC14.68□□□□□ -0.06
HMGCLP35914 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC14.68□□□□□ -0.06
HMGCLP35914 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC14.68□□□□□ -0.06
HMGCLP35914 MIR4783-201ENST00000580343 82 ntBASIC14.68□□□□□ -0.06
HMGCLP35914 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC14.68□□□□□ -0.06
HMGCLP35914 KLK11-210ENST00000600362 759 ntTSL 3 BASIC14.68□□□□□ -0.06
HMGCLP35914 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC14.68□□□□□ -0.06
HMGCLP35914 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
HMGCLP35914 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
HMGCLP35914 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC14.68□□□□□ -0.06
HMGCLP35914 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
HMGCLP35914 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
HMGCLP35914 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
HMGCLP35914 AC090505.1-201ENST00000430515 1834 ntBASIC14.68□□□□□ -0.06
HMGCLP35914 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
HMGCLP35914 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
HMGCLP35914 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
HMGCLP35914 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC14.68□□□□□ -0.06
HMGCLP35914 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
HMGCLP35914 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
HMGCLP35914 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC14.68□□□□□ -0.06
HMGCLP35914 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC14.68□□□□□ -0.06
HMGCLP35914 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
HMGCLP35914 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
HMGCLP35914 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC14.68□□□□□ -0.06
HMGCLP35914 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
HMGCLP35914 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
HMGCLP35914 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
HMGCLP35914 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
HMGCLP35914 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HMGCLP35914 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
HMGCLP35914 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
HMGCLP35914 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
HMGCLP35914 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
HMGCLP35914 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
HMGCLP35914 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HMGCLP35914 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HMGCLP35914 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC14.67□□□□□ -0.06
HMGCLP35914 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HMGCLP35914 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
HMGCLP35914 APOC3-202ENST00000375345 604 ntTSL 5 BASIC14.67□□□□□ -0.06
HMGCLP35914 HNRNPA1P27-201ENST00000412087 955 ntBASIC14.67□□□□□ -0.06
HMGCLP35914 BTBD6P1-201ENST00000412176 1267 ntBASIC14.67□□□□□ -0.06
HMGCLP35914 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC14.67□□□□□ -0.06
HMGCLP35914 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC14.67□□□□□ -0.06
HMGCLP35914 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC14.67□□□□□ -0.06
HMGCLP35914 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
HMGCLP35914 GOLGA2P4-201ENST00000441462 777 ntBASIC14.67□□□□□ -0.06
HMGCLP35914 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HMGCLP35914 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC14.67□□□□□ -0.06
HMGCLP35914 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC14.67□□□□□ -0.06
HMGCLP35914 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
HMGCLP35914 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC14.67□□□□□ -0.06
HMGCLP35914 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC14.67□□□□□ -0.06
HMGCLP35914 HNRNPA1P36-201ENST00000521313 955 ntBASIC14.67□□□□□ -0.06
HMGCLP35914 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC14.67□□□□□ -0.06
HMGCLP35914 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC14.67□□□□□ -0.06
HMGCLP35914 SORD2P-201ENST00000558556 1069 ntBASIC14.67□□□□□ -0.06
HMGCLP35914 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
HMGCLP35914 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC14.67□□□□□ -0.06
HMGCLP35914 AL162426.1-201ENST00000624141 743 ntBASIC14.67□□□□□ -0.06
HMGCLP35914 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HMGCLP35914 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HMGCLP35914 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HMGCLP35914 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC14.67□□□□□ -0.06
HMGCLP35914 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC14.67□□□□□ -0.06
HMGCLP35914 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC14.67□□□□□ -0.06
HMGCLP35914 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
HMGCLP35914 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HMGCLP35914 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC14.67□□□□□ -0.06
HMGCLP35914 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HMGCLP35914 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC14.67□□□□□ -0.06
HMGCLP35914 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HMGCLP35914 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
HMGCLP35914 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
HMGCLP35914 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HMGCLP35914 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC14.67□□□□□ -0.06
HMGCLP35914 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HMGCLP35914 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
HMGCLP35914 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HMGCLP35914 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
HMGCLP35914 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC14.66□□□□□ -0.06
HMGCLP35914 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
HMGCLP35914 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
HMGCLP35914 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HMGCLP35914 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
HMGCLP35914 AL009178.2-201ENST00000597278 2719 ntBASIC14.66□□□□□ -0.06
HMGCLP35914 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HMGCLP35914 AC139749.1-202ENST00000617529 3139 ntBASIC14.66□□□□□ -0.06
HMGCLP35914 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
HMGCLP35914 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HMGCLP35914 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HMGCLP35914 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HMGCLP35914 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC14.66□□□□□ -0.06
HMGCLP35914 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC14.66□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms