Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC15.01□□□□□ -0.01
RPA3P35244 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC15.01□□□□□ -0.01
RPA3P35244 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RPA3P35244 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC15.01□□□□□ -0.01
RPA3P35244 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RPA3P35244 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
RPA3P35244 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RPA3P35244 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
RPA3P35244 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
RPA3P35244 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
RPA3P35244 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
RPA3P35244 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RPA3P35244 AC020910.6-201ENST00000623084 1459 ntBASIC15.01□□□□□ -0.01
RPA3P35244 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
RPA3P35244 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RPA3P35244 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RPA3P35244 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC15.01□□□□□ -0.01
RPA3P35244 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
RPA3P35244 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC15.01□□□□□ -0.01
RPA3P35244 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC15□□□□□ -0.01
RPA3P35244 KRT8P14-201ENST00000414254 1442 ntBASIC15□□□□□ -0.01
RPA3P35244 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RPA3P35244 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RPA3P35244 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RPA3P35244 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
RPA3P35244 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
RPA3P35244 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC15□□□□□ -0.01
RPA3P35244 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC15□□□□□ -0.01
RPA3P35244 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
RPA3P35244 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
RPA3P35244 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC15□□□□□ -0.01
RPA3P35244 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
RPA3P35244 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC15□□□□□ -0.01
RPA3P35244 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
RPA3P35244 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC15□□□□□ -0.01
RPA3P35244 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC15□□□□□ -0.01
RPA3P35244 MYCLP2-201ENST00000449268 967 ntBASIC15□□□□□ -0.01
RPA3P35244 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC15□□□□□ -0.01
RPA3P35244 API5-211ENST00000534695 560 ntTSL 5 BASIC15□□□□□ -0.01
RPA3P35244 COX11-202ENST00000571584 1108 ntTSL 2 BASIC15□□□□□ -0.01
RPA3P35244 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC15□□□□□ -0.01
RPA3P35244 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC15□□□□□ -0.01
RPA3P35244 AL049840.4-201ENST00000602422 811 ntBASIC15□□□□□ -0.01
RPA3P35244 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC15□□□□□ -0.01
RPA3P35244 CHCHD2P3-201ENST00000603038 451 ntBASIC15□□□□□ -0.01
RPA3P35244 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC15□□□□□ -0.01
RPA3P35244 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
RPA3P35244 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC15□□□□□ -0.01
RPA3P35244 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RPA3P35244 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RPA3P35244 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC15□□□□□ -0.01
RPA3P35244 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RPA3P35244 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
RPA3P35244 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC15□□□□□ -0.01
RPA3P35244 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC15□□□□□ -0.01
RPA3P35244 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC15□□□□□ -0.01
RPA3P35244 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RPA3P35244 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC15□□□□□ -0.01
RPA3P35244 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC15□□□□□ -0.01
RPA3P35244 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RPA3P35244 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
RPA3P35244 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
RPA3P35244 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC15□□□□□ -0.01
RPA3P35244 AC023794.5-201ENST00000564380 2157 ntBASIC15□□□□□ -0.01
RPA3P35244 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
RPA3P35244 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RPA3P35244 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RPA3P35244 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC14.99□□□□□ -0.01
RPA3P35244 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC14.99□□□□□ -0.01
RPA3P35244 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
RPA3P35244 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
RPA3P35244 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
RPA3P35244 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RPA3P35244 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC14.99□□□□□ -0.01
RPA3P35244 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RPA3P35244 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
RPA3P35244 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RPA3P35244 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
RPA3P35244 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RPA3P35244 SRC-202ENST00000373558 4304 ntTSL 5 BASIC14.99□□□□□ -0.01
RPA3P35244 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RPA3P35244 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RPA3P35244 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
RPA3P35244 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
RPA3P35244 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC14.99□□□□□ -0.01
RPA3P35244 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RPA3P35244 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC14.99□□□□□ -0.01
RPA3P35244 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC14.99□□□□□ -0.01
RPA3P35244 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC14.99□□□□□ -0.01
RPA3P35244 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC14.99□□□□□ -0.01
RPA3P35244 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC14.99□□□□□ -0.01
RPA3P35244 AC008494.3-201ENST00000606615 944 ntBASIC14.99□□□□□ -0.01
RPA3P35244 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
RPA3P35244 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC14.99□□□□□ -0.01
RPA3P35244 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC14.99□□□□□ -0.01
RPA3P35244 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
RPA3P35244 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC14.99□□□□□ -0.01
RPA3P35244 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC14.99□□□□□ -0.01
RPA3P35244 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
RPA3P35244 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC14.99□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 69.5 ms