Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
TM4SF1P30408 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TM4SF1P30408 UPK1A-201ENST00000222275 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TM4SF1P30408 APOA1-203ENST00000375320 940 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
TM4SF1P30408 UPK1A-202ENST00000379013 1016 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TM4SF1P30408 DIO1-203ENST00000388876 606 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TM4SF1P30408 IGHV5-51-201ENST00000390626 410 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
TM4SF1P30408 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TM4SF1P30408 ANG-202ENST00000397990 742 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TM4SF1P30408 LINC00265-2P-201ENST00000413372 782 ntBASIC17.94■□□□□ 0.46
TM4SF1P30408 OR51A9P-201ENST00000422578 911 ntBASIC17.94■□□□□ 0.46
TM4SF1P30408 LINC00892-203ENST00000454385 686 ntTSL 3 BASIC17.94■□□□□ 0.46
TM4SF1P30408 MUTYH-231ENST00000488731 740 ntTSL 5 BASIC17.94■□□□□ 0.46
TM4SF1P30408 AC090136.2-201ENST00000517809 420 ntBASIC17.94■□□□□ 0.46
TM4SF1P30408 DIO1-204ENST00000524406 626 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TM4SF1P30408 IMMP1L-202ENST00000526776 469 ntTSL 3 BASIC17.94■□□□□ 0.46
TM4SF1P30408 DIO1-213ENST00000532493 406 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TM4SF1P30408 AC010186.1-201ENST00000546259 532 ntTSL 2 BASIC17.94■□□□□ 0.46
TM4SF1P30408 SRP14-204ENST00000558720 780 ntTSL 2 BASIC17.94■□□□□ 0.46
TM4SF1P30408 AC013553.1-201ENST00000560906 267 ntBASIC17.94■□□□□ 0.46
TM4SF1P30408 AL109954.1-202ENST00000564051 2148 ntBASIC17.94■□□□□ 0.46
TM4SF1P30408 TRMT112P3-201ENST00000580149 358 ntBASIC17.94■□□□□ 0.46
TM4SF1P30408 APOC4-202ENST00000592954 615 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TM4SF1P30408 BLACE-202ENST00000616210 540 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
TM4SF1P30408 AC091769.1-201ENST00000619576 568 ntBASIC17.94■□□□□ 0.46
TM4SF1P30408 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC17.94■□□□□ 0.46
TM4SF1P30408 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TM4SF1P30408 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC17.94■□□□□ 0.46
TM4SF1P30408 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TM4SF1P30408 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC17.94■□□□□ 0.46
TM4SF1P30408 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TM4SF1P30408 EFHD1-207ENST00000611312 1490 ntTSL 5 BASIC17.94■□□□□ 0.46
TM4SF1P30408 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC17.94■□□□□ 0.46
TM4SF1P30408 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TM4SF1P30408 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
TM4SF1P30408 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TM4SF1P30408 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC17.93■□□□□ 0.46
TM4SF1P30408 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC17.93■□□□□ 0.46
TM4SF1P30408 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TM4SF1P30408 TMEM9-202ENST00000367332 1544 ntAPPRIS ALT1 TSL 2 BASIC17.93■□□□□ 0.46
TM4SF1P30408 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.93■□□□□ 0.46
TM4SF1P30408 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC17.93■□□□□ 0.46
TM4SF1P30408 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TM4SF1P30408 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TM4SF1P30408 HYMAI-201ENST00000635591 3347 ntBASIC17.93■□□□□ 0.46
TM4SF1P30408 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
TM4SF1P30408 ZNF226-201ENST00000300823 817 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TM4SF1P30408 MIR1301-201ENST00000408518 82 ntBASIC17.93■□□□□ 0.46
TM4SF1P30408 AP002856.2-201ENST00000416553 584 ntTSL 3 BASIC17.93■□□□□ 0.46
TM4SF1P30408 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC17.93■□□□□ 0.46
TM4SF1P30408 RN7SL788P-201ENST00000460504 316 ntBASIC17.93■□□□□ 0.46
TM4SF1P30408 AC083801.1-201ENST00000491689 358 ntBASIC17.93■□□□□ 0.46
TM4SF1P30408 AC005740.1-201ENST00000515639 522 ntBASIC17.93■□□□□ 0.46
TM4SF1P30408 NUDCD2-202ENST00000517501 448 ntTSL 5 BASIC17.93■□□□□ 0.46
TM4SF1P30408 AC109479.3-201ENST00000520163 360 ntTSL 3 BASIC17.93■□□□□ 0.46
TM4SF1P30408 KLF17P1-201ENST00000547105 1126 ntBASIC17.93■□□□□ 0.46
TM4SF1P30408 AL132801.1-201ENST00000559675 567 ntTSL 4 BASIC17.93■□□□□ 0.46
TM4SF1P30408 ABHD17AP9-201ENST00000561925 548 ntBASIC17.93■□□□□ 0.46
TM4SF1P30408 MBP-238ENST00000580402 915 ntTSL 5 BASIC17.93■□□□□ 0.46
TM4SF1P30408 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
TM4SF1P30408 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
TM4SF1P30408 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
TM4SF1P30408 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC17.93■□□□□ 0.46
TM4SF1P30408 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TM4SF1P30408 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TM4SF1P30408 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TM4SF1P30408 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TM4SF1P30408 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
TM4SF1P30408 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
TM4SF1P30408 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TM4SF1P30408 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
TM4SF1P30408 DNMT3L-204ENST00000628202 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
TM4SF1P30408 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TM4SF1P30408 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TM4SF1P30408 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
TM4SF1P30408 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC17.92■□□□□ 0.46
TM4SF1P30408 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC17.92■□□□□ 0.46
TM4SF1P30408 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC17.92■□□□□ 0.46
TM4SF1P30408 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC17.92■□□□□ 0.46
TM4SF1P30408 TPRKB-203ENST00000409716 816 ntTSL 5 BASIC17.92■□□□□ 0.46
TM4SF1P30408 AC006987.1-201ENST00000413610 527 ntBASIC17.92■□□□□ 0.46
TM4SF1P30408 HTATIP2-202ENST00000421577 886 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
TM4SF1P30408 AL391832.2-203ENST00000423175 554 ntTSL 3 BASIC17.92■□□□□ 0.46
TM4SF1P30408 AL355537.2-201ENST00000453367 375 ntTSL 2 BASIC17.92■□□□□ 0.46
TM4SF1P30408 TIMM17B-204ENST00000465150 964 ntTSL 2 BASIC17.92■□□□□ 0.46
TM4SF1P30408 PFN2-212ENST00000490975 858 ntTSL 4 BASIC17.92■□□□□ 0.46
TM4SF1P30408 TRPC7-AS1-201ENST00000514459 460 ntTSL 3 BASIC17.92■□□□□ 0.46
TM4SF1P30408 AC087269.1-202ENST00000519147 400 ntTSL 3 BASIC17.92■□□□□ 0.46
TM4SF1P30408 LINC01485-202ENST00000520324 566 ntTSL 4 BASIC17.92■□□□□ 0.46
TM4SF1P30408 ANO3-205ENST00000531646 1264 ntTSL 4 BASIC17.92■□□□□ 0.46
TM4SF1P30408 TNFSF13B-206ENST00000542136 495 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TM4SF1P30408 AL162632.1-201ENST00000546784 548 ntTSL 4 BASIC17.92■□□□□ 0.46
TM4SF1P30408 TNNI1-205ENST00000555948 580 ntTSL 5 BASIC17.92■□□□□ 0.46
TM4SF1P30408 MT2A-202ENST00000561491 581 ntTSL 2 BASIC17.92■□□□□ 0.46
TM4SF1P30408 BRSK1-203ENST00000585418 1104 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TM4SF1P30408 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TM4SF1P30408 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TM4SF1P30408 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TM4SF1P30408 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC17.92■□□□□ 0.46
TM4SF1P30408 ETNPPL-206ENST00000510706 1692 ntTSL 2 BASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms