Protein–RNA interactions for Protein: P26374

CHML, Rab proteins geranylgeranyltransferase component A 2, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMLP26374 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.43
CHMLP26374 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CHMLP26374 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC17.77■□□□□ 0.43
CHMLP26374 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC17.77■□□□□ 0.43
CHMLP26374 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
CHMLP26374 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
CHMLP26374 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
CHMLP26374 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
CHMLP26374 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
CHMLP26374 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CHMLP26374 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CHMLP26374 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CHMLP26374 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC17.76■□□□□ 0.43
CHMLP26374 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC17.76■□□□□ 0.43
CHMLP26374 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CHMLP26374 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
CHMLP26374 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC17.76■□□□□ 0.43
CHMLP26374 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC17.76■□□□□ 0.43
CHMLP26374 MPV17-206ENST00000402722 827 ntTSL 3 BASIC17.76■□□□□ 0.43
CHMLP26374 AC010141.1-201ENST00000411585 623 ntBASIC17.76■□□□□ 0.43
CHMLP26374 AC026954.1-201ENST00000429771 1293 ntBASIC17.76■□□□□ 0.43
CHMLP26374 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC17.76■□□□□ 0.43
CHMLP26374 CNN2P10-201ENST00000443067 918 ntBASIC17.76■□□□□ 0.43
CHMLP26374 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CHMLP26374 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
CHMLP26374 PPY2P-201ENST00000582808 702 ntBASIC17.76■□□□□ 0.43
CHMLP26374 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CHMLP26374 AC008825.2-201ENST00000603374 718 ntBASIC17.76■□□□□ 0.43
CHMLP26374 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC17.76■□□□□ 0.43
CHMLP26374 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CHMLP26374 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC17.76■□□□□ 0.43
CHMLP26374 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
CHMLP26374 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC17.76■□□□□ 0.43
CHMLP26374 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CHMLP26374 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
CHMLP26374 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CHMLP26374 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CHMLP26374 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC17.76■□□□□ 0.43
CHMLP26374 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CHMLP26374 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CHMLP26374 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC17.76■□□□□ 0.43
CHMLP26374 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CHMLP26374 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC17.76■□□□□ 0.43
CHMLP26374 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC17.76■□□□□ 0.43
CHMLP26374 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC17.75■□□□□ 0.43
CHMLP26374 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CHMLP26374 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CHMLP26374 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC17.75■□□□□ 0.43
CHMLP26374 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CHMLP26374 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
CHMLP26374 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC17.75■□□□□ 0.43
CHMLP26374 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CHMLP26374 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CHMLP26374 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CHMLP26374 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CHMLP26374 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CHMLP26374 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CHMLP26374 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CHMLP26374 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CHMLP26374 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC17.75■□□□□ 0.43
CHMLP26374 AC079776.1-201ENST00000401540 1152 ntBASIC17.75■□□□□ 0.43
CHMLP26374 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC17.75■□□□□ 0.43
CHMLP26374 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CHMLP26374 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC17.75■□□□□ 0.43
CHMLP26374 GAPDHP21-201ENST00000450301 1010 ntBASIC17.75■□□□□ 0.43
CHMLP26374 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
CHMLP26374 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC17.75■□□□□ 0.43
CHMLP26374 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC17.75■□□□□ 0.43
CHMLP26374 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC17.75■□□□□ 0.43
CHMLP26374 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC17.75■□□□□ 0.43
CHMLP26374 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CHMLP26374 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC17.75■□□□□ 0.43
CHMLP26374 AC106886.1-201ENST00000568660 600 ntBASIC17.75■□□□□ 0.43
CHMLP26374 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CHMLP26374 AC027601.3-201ENST00000622907 509 ntBASIC17.75■□□□□ 0.43
CHMLP26374 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CHMLP26374 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CHMLP26374 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CHMLP26374 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
CHMLP26374 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CHMLP26374 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CHMLP26374 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
CHMLP26374 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CHMLP26374 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CHMLP26374 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
CHMLP26374 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CHMLP26374 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
CHMLP26374 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
CHMLP26374 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
CHMLP26374 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
CHMLP26374 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC17.75■□□□□ 0.43
CHMLP26374 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CHMLP26374 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
CHMLP26374 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CHMLP26374 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC17.75■□□□□ 0.43
CHMLP26374 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC17.75■□□□□ 0.43
CHMLP26374 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CHMLP26374 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CHMLP26374 OS9-207ENST00000439210 1946 ntTSL 2 BASIC17.74■□□□□ 0.43
CHMLP26374 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 92.3 ms