Protein–RNA interactions for Protein: P25800

LMO1, Rhombotin-1, humanhuman

Predictions only

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1P25800 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC12.43□□□□□ -0.42
LMO1P25800 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC12.43□□□□□ -0.42
LMO1P25800 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC12.43□□□□□ -0.42
LMO1P25800 PIGL-212ENST00000581006 554 ntTSL 4 BASIC12.43□□□□□ -0.42
LMO1P25800 GNRHR2-203ENST00000581100 1187 ntBASIC12.43□□□□□ -0.42
LMO1P25800 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
LMO1P25800 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
LMO1P25800 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC12.43□□□□□ -0.42
LMO1P25800 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC12.43□□□□□ -0.42
LMO1P25800 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC12.43□□□□□ -0.42
LMO1P25800 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
LMO1P25800 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LMO1P25800 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LMO1P25800 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
LMO1P25800 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
LMO1P25800 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC12.43□□□□□ -0.42
LMO1P25800 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC12.43□□□□□ -0.42
LMO1P25800 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LMO1P25800 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC12.43□□□□□ -0.42
LMO1P25800 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC12.43□□□□□ -0.42
LMO1P25800 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LMO1P25800 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
LMO1P25800 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
LMO1P25800 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
LMO1P25800 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC12.43□□□□□ -0.42
LMO1P25800 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
LMO1P25800 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
LMO1P25800 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC12.43□□□□□ -0.42
LMO1P25800 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC12.43□□□□□ -0.42
LMO1P25800 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC12.43□□□□□ -0.42
LMO1P25800 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC12.43□□□□□ -0.42
LMO1P25800 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LMO1P25800 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
LMO1P25800 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC12.42□□□□□ -0.42
LMO1P25800 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC12.42□□□□□ -0.42
LMO1P25800 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LMO1P25800 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC12.42□□□□□ -0.42
LMO1P25800 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LMO1P25800 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
LMO1P25800 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
LMO1P25800 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC12.42□□□□□ -0.42
LMO1P25800 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC12.42□□□□□ -0.42
LMO1P25800 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LMO1P25800 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
LMO1P25800 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LMO1P25800 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LMO1P25800 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC12.42□□□□□ -0.42
LMO1P25800 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LMO1P25800 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
LMO1P25800 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LMO1P25800 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LMO1P25800 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LMO1P25800 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
LMO1P25800 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
LMO1P25800 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
LMO1P25800 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LMO1P25800 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
LMO1P25800 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC12.42□□□□□ -0.42
LMO1P25800 AC092933.1-201ENST00000393644 945 ntBASIC12.42□□□□□ -0.42
LMO1P25800 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC12.42□□□□□ -0.42
LMO1P25800 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC12.42□□□□□ -0.42
LMO1P25800 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC12.42□□□□□ -0.42
LMO1P25800 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC12.42□□□□□ -0.42
LMO1P25800 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC12.42□□□□□ -0.42
LMO1P25800 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC12.42□□□□□ -0.42
LMO1P25800 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC12.42□□□□□ -0.42
LMO1P25800 AC106760.1-201ENST00000508690 800 ntBASIC12.42□□□□□ -0.42
LMO1P25800 RNA5SP486-201ENST00000515961 83 ntBASIC12.42□□□□□ -0.42
LMO1P25800 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC12.42□□□□□ -0.42
LMO1P25800 SLC25A47P1-201ENST00000531577 414 ntBASIC12.42□□□□□ -0.42
LMO1P25800 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC12.42□□□□□ -0.42
LMO1P25800 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
LMO1P25800 POLE2-203ENST00000553805 496 ntTSL 2 BASIC12.42□□□□□ -0.42
LMO1P25800 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC12.42□□□□□ -0.42
LMO1P25800 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC12.42□□□□□ -0.42
LMO1P25800 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC12.42□□□□□ -0.42
LMO1P25800 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
LMO1P25800 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC12.42□□□□□ -0.42
LMO1P25800 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC12.42□□□□□ -0.42
LMO1P25800 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LMO1P25800 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
LMO1P25800 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
LMO1P25800 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC12.42□□□□□ -0.42
LMO1P25800 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
LMO1P25800 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
LMO1P25800 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
LMO1P25800 INE2-201ENST00000630399 1874 ntBASIC12.42□□□□□ -0.42
LMO1P25800 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LMO1P25800 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
LMO1P25800 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
LMO1P25800 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LMO1P25800 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LMO1P25800 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC12.41□□□□□ -0.42
LMO1P25800 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC12.41□□□□□ -0.42
LMO1P25800 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
LMO1P25800 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LMO1P25800 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LMO1P25800 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC12.41□□□□□ -0.42
LMO1P25800 AC015909.5-201ENST00000624336 2266 ntBASIC12.41□□□□□ -0.42
LMO1P25800 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 66.4 ms