Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC12.72□□□□□ -0.37
TNFSF4P23510 RN7SL713P-201ENST00000582127 302 ntBASIC12.72□□□□□ -0.37
TNFSF4P23510 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC12.72□□□□□ -0.37
TNFSF4P23510 WNT11-204ENST00000621122 789 ntTSL 5 BASIC12.72□□□□□ -0.37
TNFSF4P23510 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC12.72□□□□□ -0.37
TNFSF4P23510 FLT4-201ENST00000261937 5857 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TNFSF4P23510 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
TNFSF4P23510 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC12.72□□□□□ -0.37
TNFSF4P23510 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC12.72□□□□□ -0.37
TNFSF4P23510 LAMB1-201ENST00000222399 5725 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TNFSF4P23510 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC12.72□□□□□ -0.37
TNFSF4P23510 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
TNFSF4P23510 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TNFSF4P23510 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
TNFSF4P23510 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TNFSF4P23510 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC12.72□□□□□ -0.37
TNFSF4P23510 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TNFSF4P23510 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
TNFSF4P23510 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TNFSF4P23510 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
TNFSF4P23510 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TNFSF4P23510 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TNFSF4P23510 NEK9-201ENST00000238616 8310 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
TNFSF4P23510 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
TNFSF4P23510 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
TNFSF4P23510 TRAF3-208ENST00000560371 7640 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
TNFSF4P23510 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
TNFSF4P23510 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
TNFSF4P23510 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
TNFSF4P23510 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
TNFSF4P23510 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
TNFSF4P23510 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
TNFSF4P23510 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC12.71□□□□□ -0.37
TNFSF4P23510 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
TNFSF4P23510 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC12.71□□□□□ -0.37
TNFSF4P23510 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
TNFSF4P23510 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
TNFSF4P23510 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
TNFSF4P23510 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
TNFSF4P23510 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
TNFSF4P23510 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
TNFSF4P23510 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
TNFSF4P23510 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC12.71□□□□□ -0.37
TNFSF4P23510 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC12.71□□□□□ -0.37
TNFSF4P23510 AC026954.1-201ENST00000429771 1293 ntBASIC12.71□□□□□ -0.37
TNFSF4P23510 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.37
TNFSF4P23510 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC12.71□□□□□ -0.37
TNFSF4P23510 AC106820.3-201ENST00000561653 397 ntBASIC12.71□□□□□ -0.37
TNFSF4P23510 NAA38-206ENST00000576384 424 ntTSL 2 BASIC12.71□□□□□ -0.37
TNFSF4P23510 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC12.71□□□□□ -0.37
TNFSF4P23510 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.38
TNFSF4P23510 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC12.71□□□□□ -0.38
TNFSF4P23510 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC12.71□□□□□ -0.38
TNFSF4P23510 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
TNFSF4P23510 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
TNFSF4P23510 ZMIZ2-206ENST00000441627 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.38
TNFSF4P23510 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
TNFSF4P23510 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC12.71□□□□□ -0.38
TNFSF4P23510 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC12.71□□□□□ -0.38
TNFSF4P23510 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
TNFSF4P23510 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
TNFSF4P23510 SF1-209ENST00000433274 2317 ntTSL 2 BASIC12.71□□□□□ -0.38
TNFSF4P23510 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
TNFSF4P23510 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
TNFSF4P23510 AP000593.2-201ENST00000542775 1433 ntBASIC12.71□□□□□ -0.38
TNFSF4P23510 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC12.71□□□□□ -0.38
TNFSF4P23510 STAB1-201ENST00000321725 7928 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
TNFSF4P23510 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
TNFSF4P23510 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
TNFSF4P23510 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TNFSF4P23510 ZNF286B-205ENST00000545289 5328 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
TNFSF4P23510 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
TNFSF4P23510 SYNGAP1-208ENST00000629380 9862 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
TNFSF4P23510 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
TNFSF4P23510 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC12.7□□□□□ -0.38
TNFSF4P23510 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC12.7□□□□□ -0.38
TNFSF4P23510 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
TNFSF4P23510 AL138725.1-201ENST00000407347 1314 ntBASIC12.7□□□□□ -0.38
TNFSF4P23510 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
TNFSF4P23510 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TNFSF4P23510 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
TNFSF4P23510 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
TNFSF4P23510 CEP126-201ENST00000263468 7039 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
TNFSF4P23510 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC12.7□□□□□ -0.38
TNFSF4P23510 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TNFSF4P23510 MARS-233ENST00000628866 2583 ntTSL 5 BASIC12.7□□□□□ -0.38
TNFSF4P23510 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
TNFSF4P23510 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TNFSF4P23510 ANKRD19P-201ENST00000338192 862 ntBASIC12.7□□□□□ -0.38
TNFSF4P23510 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TNFSF4P23510 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
TNFSF4P23510 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC12.7□□□□□ -0.38
TNFSF4P23510 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TNFSF4P23510 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
TNFSF4P23510 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
TNFSF4P23510 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TNFSF4P23510 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC12.7□□□□□ -0.38
TNFSF4P23510 AL136309.1-201ENST00000403917 691 ntBASIC12.7□□□□□ -0.38
TNFSF4P23510 NDUFAB1P1-201ENST00000404262 460 ntBASIC12.7□□□□□ -0.38
TNFSF4P23510 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms