Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC14.95□□□□□ -0.02
HLA-DPA1P20036 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC14.95□□□□□ -0.02
HLA-DPA1P20036 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC14.95□□□□□ -0.02
HLA-DPA1P20036 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC14.95□□□□□ -0.02
HLA-DPA1P20036 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
HLA-DPA1P20036 PUDPP3-201ENST00000445368 636 ntBASIC14.95□□□□□ -0.02
HLA-DPA1P20036 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC14.95□□□□□ -0.02
HLA-DPA1P20036 COX5BP1-201ENST00000507622 393 ntBASIC14.95□□□□□ -0.02
HLA-DPA1P20036 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC14.95□□□□□ -0.02
HLA-DPA1P20036 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
HLA-DPA1P20036 PUDP-206ENST00000540122 825 ntTSL 2 BASIC14.95□□□□□ -0.02
HLA-DPA1P20036 AC079316.1-201ENST00000548397 411 ntBASIC14.95□□□□□ -0.02
HLA-DPA1P20036 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC14.95□□□□□ -0.02
HLA-DPA1P20036 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC14.95□□□□□ -0.02
HLA-DPA1P20036 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
HLA-DPA1P20036 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC14.95□□□□□ -0.02
HLA-DPA1P20036 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC14.95□□□□□ -0.02
HLA-DPA1P20036 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC14.95□□□□□ -0.02
HLA-DPA1P20036 AC002472.3-201ENST00000640124 621 ntBASIC14.95□□□□□ -0.02
HLA-DPA1P20036 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
HLA-DPA1P20036 AL009178.2-201ENST00000597278 2719 ntBASIC14.95□□□□□ -0.02
HLA-DPA1P20036 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
HLA-DPA1P20036 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
HLA-DPA1P20036 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HLA-DPA1P20036 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
HLA-DPA1P20036 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
HLA-DPA1P20036 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HLA-DPA1P20036 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HLA-DPA1P20036 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
HLA-DPA1P20036 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
HLA-DPA1P20036 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC14.95□□□□□ -0.02
HLA-DPA1P20036 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC14.95□□□□□ -0.02
HLA-DPA1P20036 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
HLA-DPA1P20036 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HLA-DPA1P20036 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HLA-DPA1P20036 ABR-205ENST00000544583 5595 ntTSL 2 BASIC14.95□□□□□ -0.02
HLA-DPA1P20036 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HLA-DPA1P20036 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HLA-DPA1P20036 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
HLA-DPA1P20036 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HLA-DPA1P20036 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
HLA-DPA1P20036 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC14.94□□□□□ -0.02
HLA-DPA1P20036 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC14.94□□□□□ -0.02
HLA-DPA1P20036 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
HLA-DPA1P20036 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC14.94□□□□□ -0.02
HLA-DPA1P20036 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HLA-DPA1P20036 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC14.94□□□□□ -0.02
HLA-DPA1P20036 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HLA-DPA1P20036 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HLA-DPA1P20036 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HLA-DPA1P20036 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
HLA-DPA1P20036 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC14.94□□□□□ -0.02
HLA-DPA1P20036 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HLA-DPA1P20036 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
HLA-DPA1P20036 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
HLA-DPA1P20036 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HLA-DPA1P20036 OR8S1-201ENST00000310194 1080 ntBASIC14.94□□□□□ -0.02
HLA-DPA1P20036 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
HLA-DPA1P20036 AL136309.1-201ENST00000403917 691 ntBASIC14.94□□□□□ -0.02
HLA-DPA1P20036 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC14.94□□□□□ -0.02
HLA-DPA1P20036 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC14.94□□□□□ -0.02
HLA-DPA1P20036 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC14.94□□□□□ -0.02
HLA-DPA1P20036 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
HLA-DPA1P20036 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
HLA-DPA1P20036 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC14.94□□□□□ -0.02
HLA-DPA1P20036 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC14.94□□□□□ -0.02
HLA-DPA1P20036 RAB43P1-201ENST00000561790 589 ntBASIC14.94□□□□□ -0.02
HLA-DPA1P20036 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC14.94□□□□□ -0.02
HLA-DPA1P20036 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC14.94□□□□□ -0.02
HLA-DPA1P20036 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC14.94□□□□□ -0.02
HLA-DPA1P20036 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC14.94□□□□□ -0.02
HLA-DPA1P20036 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC14.94□□□□□ -0.02
HLA-DPA1P20036 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
HLA-DPA1P20036 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
HLA-DPA1P20036 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
HLA-DPA1P20036 AC005089.1-201ENST00000619486 2241 ntBASIC14.94□□□□□ -0.02
HLA-DPA1P20036 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
HLA-DPA1P20036 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
HLA-DPA1P20036 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
HLA-DPA1P20036 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HLA-DPA1P20036 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
HLA-DPA1P20036 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC14.94□□□□□ -0.02
HLA-DPA1P20036 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
HLA-DPA1P20036 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HLA-DPA1P20036 AC097359.2-201ENST00000604992 2389 ntBASIC14.93□□□□□ -0.02
HLA-DPA1P20036 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
HLA-DPA1P20036 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC14.93□□□□□ -0.02
HLA-DPA1P20036 MYADML-201ENST00000474610 2147 ntBASIC14.93□□□□□ -0.02
HLA-DPA1P20036 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HLA-DPA1P20036 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HLA-DPA1P20036 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
HLA-DPA1P20036 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
HLA-DPA1P20036 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HLA-DPA1P20036 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
HLA-DPA1P20036 AC126335.2-201ENST00000623362 4637 ntBASIC14.93□□□□□ -0.02
HLA-DPA1P20036 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
HLA-DPA1P20036 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC14.93□□□□□ -0.02
HLA-DPA1P20036 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HLA-DPA1P20036 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
HLA-DPA1P20036 MPV17-206ENST00000402722 827 ntTSL 3 BASIC14.93□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 67.9 ms