Protein–RNA interactions for Protein: P20020

ATP2B1, Plasma membrane calcium-transporting ATPase 1, humanhuman

Predictions only

Length 1,258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B1P20020 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
ATP2B1P20020 GRK6P1-201ENST00000400595 1711 ntBASIC17.13■□□□□ 0.33
ATP2B1P20020 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC17.13■□□□□ 0.33
ATP2B1P20020 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC17.13■□□□□ 0.33
ATP2B1P20020 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC17.13■□□□□ 0.33
ATP2B1P20020 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ATP2B1P20020 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
ATP2B1P20020 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ATP2B1P20020 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ATP2B1P20020 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ATP2B1P20020 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC17.12■□□□□ 0.33
ATP2B1P20020 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC17.12■□□□□ 0.33
ATP2B1P20020 AC131212.3-201ENST00000624087 4219 ntBASIC17.12■□□□□ 0.33
ATP2B1P20020 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ATP2B1P20020 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ATP2B1P20020 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC17.12■□□□□ 0.33
ATP2B1P20020 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ATP2B1P20020 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ATP2B1P20020 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ATP2B1P20020 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC17.12■□□□□ 0.33
ATP2B1P20020 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
ATP2B1P20020 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
ATP2B1P20020 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
ATP2B1P20020 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC17.12■□□□□ 0.33
ATP2B1P20020 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ATP2B1P20020 PGF-202ENST00000405431 666 ntTSL 5 BASIC17.12■□□□□ 0.33
ATP2B1P20020 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC17.12■□□□□ 0.33
ATP2B1P20020 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
ATP2B1P20020 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC17.12■□□□□ 0.33
ATP2B1P20020 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC17.12■□□□□ 0.33
ATP2B1P20020 AL590640.2-201ENST00000457038 527 ntBASIC17.12■□□□□ 0.33
ATP2B1P20020 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
ATP2B1P20020 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC17.12■□□□□ 0.33
ATP2B1P20020 FUZ-207ENST00000526575 482 ntTSL 4 BASIC17.12■□□□□ 0.33
ATP2B1P20020 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC17.12■□□□□ 0.33
ATP2B1P20020 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
ATP2B1P20020 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC17.12■□□□□ 0.33
ATP2B1P20020 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
ATP2B1P20020 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC17.12■□□□□ 0.33
ATP2B1P20020 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
ATP2B1P20020 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ATP2B1P20020 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
ATP2B1P20020 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ATP2B1P20020 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
ATP2B1P20020 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ATP2B1P20020 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ATP2B1P20020 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC17.12■□□□□ 0.33
ATP2B1P20020 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
ATP2B1P20020 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
ATP2B1P20020 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ATP2B1P20020 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ATP2B1P20020 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ATP2B1P20020 ABR-228ENST00000574437 3196 ntTSL 5 BASIC17.12■□□□□ 0.33
ATP2B1P20020 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
ATP2B1P20020 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ATP2B1P20020 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC17.11■□□□□ 0.33
ATP2B1P20020 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ATP2B1P20020 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ATP2B1P20020 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
ATP2B1P20020 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ATP2B1P20020 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ATP2B1P20020 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ATP2B1P20020 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
ATP2B1P20020 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC17.11■□□□□ 0.33
ATP2B1P20020 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC17.11■□□□□ 0.33
ATP2B1P20020 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC17.11■□□□□ 0.33
ATP2B1P20020 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC17.11■□□□□ 0.33
ATP2B1P20020 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ATP2B1P20020 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ATP2B1P20020 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
ATP2B1P20020 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ATP2B1P20020 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ATP2B1P20020 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC17.11■□□□□ 0.33
ATP2B1P20020 AC245100.3-201ENST00000441281 285 ntBASIC17.11■□□□□ 0.33
ATP2B1P20020 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC17.11■□□□□ 0.33
ATP2B1P20020 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ATP2B1P20020 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC17.11■□□□□ 0.33
ATP2B1P20020 GNRHR2-203ENST00000581100 1187 ntBASIC17.11■□□□□ 0.33
ATP2B1P20020 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
ATP2B1P20020 BTNL10-201ENST00000595971 695 ntBASIC17.11■□□□□ 0.33
ATP2B1P20020 ECM1P1-201ENST00000604092 1279 ntBASIC17.11■□□□□ 0.33
ATP2B1P20020 AC244669.2-201ENST00000612320 853 ntBASIC17.11■□□□□ 0.33
ATP2B1P20020 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC17.11■□□□□ 0.33
ATP2B1P20020 ENPP7P14-201ENST00000621765 1040 ntBASIC17.11■□□□□ 0.33
ATP2B1P20020 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC17.11■□□□□ 0.33
ATP2B1P20020 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC17.11■□□□□ 0.33
ATP2B1P20020 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC17.11■□□□□ 0.33
ATP2B1P20020 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ATP2B1P20020 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
ATP2B1P20020 CLUHP2-201ENST00000426660 1303 ntBASIC17.11■□□□□ 0.33
ATP2B1P20020 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ATP2B1P20020 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ATP2B1P20020 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ATP2B1P20020 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
ATP2B1P20020 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
ATP2B1P20020 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
ATP2B1P20020 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
ATP2B1P20020 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
ATP2B1P20020 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC17.1■□□□□ 0.33
ATP2B1P20020 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms