Protein–RNA interactions for Protein: P18847

ATF3, Cyclic AMP-dependent transcription factor ATF-3, humanhuman

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3P18847 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC19.88■□□□□ 0.77
ATF3P18847 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ATF3P18847 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
ATF3P18847 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC19.88■□□□□ 0.77
ATF3P18847 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC19.88■□□□□ 0.77
ATF3P18847 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC19.88■□□□□ 0.77
ATF3P18847 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
ATF3P18847 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC19.88■□□□□ 0.77
ATF3P18847 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC19.87■□□□□ 0.77
ATF3P18847 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
ATF3P18847 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ATF3P18847 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
ATF3P18847 MROH4P-201ENST00000431302 1578 ntBASIC19.87■□□□□ 0.77
ATF3P18847 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC19.87■□□□□ 0.77
ATF3P18847 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ATF3P18847 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
ATF3P18847 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC19.87■□□□□ 0.77
ATF3P18847 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
ATF3P18847 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC19.87■□□□□ 0.77
ATF3P18847 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC19.87■□□□□ 0.77
ATF3P18847 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
ATF3P18847 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
ATF3P18847 PIFO-201ENST00000369737 746 ntTSL 2 BASIC19.87■□□□□ 0.77
ATF3P18847 CD300LG-203ENST00000377203 1060 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
ATF3P18847 S100A13-203ENST00000392623 579 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
ATF3P18847 AC006987.1-201ENST00000413610 527 ntBASIC19.87■□□□□ 0.77
ATF3P18847 AC093609.1-201ENST00000434020 952 ntTSL 2 BASIC19.87■□□□□ 0.77
ATF3P18847 AC090152.1-203ENST00000517898 1106 ntTSL 2 BASIC19.87■□□□□ 0.77
ATF3P18847 IGHEP2-201ENST00000519308 1256 ntBASIC19.87■□□□□ 0.77
ATF3P18847 MED11-202ENST00000573708 802 ntTSL 2 BASIC19.87■□□□□ 0.77
ATF3P18847 NT5C-204ENST00000578337 582 ntTSL 2 BASIC19.87■□□□□ 0.77
ATF3P18847 LINC02333-201ENST00000603464 852 ntTSL 3 BASIC19.87■□□□□ 0.77
ATF3P18847 AC017033.1-201ENST00000603720 708 ntTSL 2 BASIC19.87■□□□□ 0.77
ATF3P18847 AL135936.1-201ENST00000617956 998 ntTSL 5 BASIC19.87■□□□□ 0.77
ATF3P18847 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
ATF3P18847 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ATF3P18847 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
ATF3P18847 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
ATF3P18847 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
ATF3P18847 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
ATF3P18847 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ATF3P18847 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC19.87■□□□□ 0.77
ATF3P18847 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC19.87■□□□□ 0.77
ATF3P18847 MPI-203ENST00000535694 1523 ntTSL 2 BASIC19.86■□□□□ 0.77
ATF3P18847 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ATF3P18847 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC19.86■□□□□ 0.77
ATF3P18847 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ATF3P18847 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
ATF3P18847 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC19.86■□□□□ 0.77
ATF3P18847 ATP5A1-201ENST00000282050 1945 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
ATF3P18847 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
ATF3P18847 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC19.86■□□□□ 0.77
ATF3P18847 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
ATF3P18847 FKBP4P8-201ENST00000610931 1369 ntBASIC19.86■□□□□ 0.77
ATF3P18847 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
ATF3P18847 KHSRPP1-201ENST00000427983 1768 ntBASIC19.86■□□□□ 0.77
ATF3P18847 GALP-201ENST00000357330 938 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ATF3P18847 AC106827.1-201ENST00000366454 431 ntBASIC19.86■□□□□ 0.77
ATF3P18847 PEMT-204ENST00000395783 1008 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ATF3P18847 ATP5J-202ENST00000400087 826 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
ATF3P18847 COLEC11-204ENST00000402794 1134 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
ATF3P18847 COPS7B-204ENST00000409091 806 ntTSL 5 BASIC19.86■□□□□ 0.77
ATF3P18847 ID2-AS1-201ENST00000412712 953 ntTSL 5 BASIC19.86■□□□□ 0.77
ATF3P18847 SIX3-AS1-201ENST00000419364 844 ntTSL 2 BASIC19.86■□□□□ 0.77
ATF3P18847 GALP-202ENST00000440823 889 ntTSL 5 BASIC19.86■□□□□ 0.77
ATF3P18847 LINC00313-207ENST00000451543 413 ntTSL 3 BASIC19.86■□□□□ 0.77
ATF3P18847 WNT5A-205ENST00000497027 1299 ntTSL 2 BASIC19.86■□□□□ 0.77
ATF3P18847 AC023090.1-201ENST00000592906 502 ntTSL 3 BASIC19.86■□□□□ 0.77
ATF3P18847 Metazoa_SRP.75-201ENST00000614439 293 ntBASIC19.86■□□□□ 0.77
ATF3P18847 LINC01669-201ENST00000623161 413 ntTSL 3 BASIC19.86■□□□□ 0.77
ATF3P18847 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
ATF3P18847 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC19.86■□□□□ 0.77
ATF3P18847 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
ATF3P18847 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ATF3P18847 AC067931.2-201ENST00000623655 2003 ntBASIC19.86■□□□□ 0.77
ATF3P18847 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
ATF3P18847 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ATF3P18847 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ATF3P18847 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC19.86■□□□□ 0.77
ATF3P18847 PPHLN1-223ENST00000610488 1521 ntTSL 5 BASIC19.86■□□□□ 0.77
ATF3P18847 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
ATF3P18847 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC19.86■□□□□ 0.77
ATF3P18847 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
ATF3P18847 CR382285.1-201ENST00000625012 1485 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
ATF3P18847 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC19.86■□□□□ 0.77
ATF3P18847 BCCIP-203ENST00000368759 1433 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
ATF3P18847 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
ATF3P18847 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
ATF3P18847 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
ATF3P18847 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ATF3P18847 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC19.85■□□□□ 0.77
ATF3P18847 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC19.85■□□□□ 0.77
ATF3P18847 FDFT1-214ENST00000528812 2013 ntTSL 2 BASIC19.85■□□□□ 0.77
ATF3P18847 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC19.85■□□□□ 0.77
ATF3P18847 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
ATF3P18847 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ATF3P18847 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC19.85■□□□□ 0.77
ATF3P18847 PGLYRP3-201ENST00000290722 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ATF3P18847 ODF3L1-201ENST00000332145 1196 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ATF3P18847 GEMIN8P4-201ENST00000380526 729 ntBASIC19.85■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms