Protein–RNA interactions for Protein: P16402

HIST1H1D, Histone H1.3, humanhuman

Known RBP Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1DP16402 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
HIST1H1DP16402 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
HIST1H1DP16402 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC12.59□□□□□ -0.39
HIST1H1DP16402 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
HIST1H1DP16402 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC12.59□□□□□ -0.39
HIST1H1DP16402 MRPL37P1-201ENST00000592451 1337 ntBASIC12.59□□□□□ -0.39
HIST1H1DP16402 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
HIST1H1DP16402 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC12.59□□□□□ -0.39
HIST1H1DP16402 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
HIST1H1DP16402 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
HIST1H1DP16402 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC12.59□□□□□ -0.39
HIST1H1DP16402 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
HIST1H1DP16402 AC015688.4-201ENST00000580780 1647 ntBASIC12.59□□□□□ -0.39
HIST1H1DP16402 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.39
HIST1H1DP16402 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.39
HIST1H1DP16402 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
HIST1H1DP16402 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC12.58□□□□□ -0.39
HIST1H1DP16402 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
HIST1H1DP16402 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC12.58□□□□□ -0.4
HIST1H1DP16402 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
HIST1H1DP16402 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC12.58□□□□□ -0.4
HIST1H1DP16402 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
HIST1H1DP16402 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
HIST1H1DP16402 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
HIST1H1DP16402 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
HIST1H1DP16402 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
HIST1H1DP16402 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
HIST1H1DP16402 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC12.58□□□□□ -0.4
HIST1H1DP16402 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
HIST1H1DP16402 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
HIST1H1DP16402 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
HIST1H1DP16402 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
HIST1H1DP16402 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
HIST1H1DP16402 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
HIST1H1DP16402 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC12.58□□□□□ -0.4
HIST1H1DP16402 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC12.58□□□□□ -0.4
HIST1H1DP16402 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
HIST1H1DP16402 TSEN15P1-201ENST00000423257 515 ntBASIC12.58□□□□□ -0.4
HIST1H1DP16402 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
HIST1H1DP16402 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC12.58□□□□□ -0.4
HIST1H1DP16402 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
HIST1H1DP16402 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC12.58□□□□□ -0.4
HIST1H1DP16402 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC12.58□□□□□ -0.4
HIST1H1DP16402 RHOA-206ENST00000454011 889 ntTSL 2 BASIC12.58□□□□□ -0.4
HIST1H1DP16402 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC12.58□□□□□ -0.4
HIST1H1DP16402 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
HIST1H1DP16402 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
HIST1H1DP16402 SPDYE18-201ENST00000510091 1050 ntBASIC12.58□□□□□ -0.4
HIST1H1DP16402 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
HIST1H1DP16402 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
HIST1H1DP16402 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC12.58□□□□□ -0.4
HIST1H1DP16402 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC12.58□□□□□ -0.4
HIST1H1DP16402 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC12.58□□□□□ -0.4
HIST1H1DP16402 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
HIST1H1DP16402 CETP-203ENST00000566128 1733 ntTSL 5 BASIC12.58□□□□□ -0.4
HIST1H1DP16402 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC12.58□□□□□ -0.4
HIST1H1DP16402 AC015911.4-201ENST00000588022 1070 ntBASIC12.58□□□□□ -0.4
HIST1H1DP16402 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC12.58□□□□□ -0.4
HIST1H1DP16402 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC12.58□□□□□ -0.4
HIST1H1DP16402 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
HIST1H1DP16402 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
HIST1H1DP16402 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
HIST1H1DP16402 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
HIST1H1DP16402 AL590560.3-201ENST00000623350 461 ntBASIC12.58□□□□□ -0.4
HIST1H1DP16402 AC073548.1-201ENST00000624088 1882 ntBASIC12.58□□□□□ -0.4
HIST1H1DP16402 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
HIST1H1DP16402 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC12.58□□□□□ -0.4
HIST1H1DP16402 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
HIST1H1DP16402 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC12.58□□□□□ -0.4
HIST1H1DP16402 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
HIST1H1DP16402 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC12.58□□□□□ -0.4
HIST1H1DP16402 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC12.58□□□□□ -0.4
HIST1H1DP16402 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
HIST1H1DP16402 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
HIST1H1DP16402 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
HIST1H1DP16402 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
HIST1H1DP16402 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC12.58□□□□□ -0.4
HIST1H1DP16402 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
HIST1H1DP16402 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
HIST1H1DP16402 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC12.58□□□□□ -0.4
HIST1H1DP16402 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
HIST1H1DP16402 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.4
HIST1H1DP16402 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
HIST1H1DP16402 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
HIST1H1DP16402 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
HIST1H1DP16402 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC12.58□□□□□ -0.4
HIST1H1DP16402 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
HIST1H1DP16402 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
HIST1H1DP16402 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
HIST1H1DP16402 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
HIST1H1DP16402 CROT-203ENST00000419147 2959 ntTSL 2 BASIC12.57□□□□□ -0.4
HIST1H1DP16402 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
HIST1H1DP16402 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
HIST1H1DP16402 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
HIST1H1DP16402 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
HIST1H1DP16402 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
HIST1H1DP16402 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
HIST1H1DP16402 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
HIST1H1DP16402 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC12.57□□□□□ -0.4
HIST1H1DP16402 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms